RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
UBE3B-209ENST00000539584 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
UBE3B-209ENST00000539584 WASHC2CQ9Y4E1 1318 aa17.8■□□□□ 0.44
UBE3B-209ENST00000539584 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
UBE3B-209ENST00000539584 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
UBE3B-209ENST00000539584 E9PCH4 1651 aa17.79■□□□□ 0.44
UBE3B-209ENST00000539584 ATP10BO94823 1461 aa17.78■□□□□ 0.44
UBE3B-209ENST00000539584 POLR3GLQ9BT43 218 aa17.77■□□□□ 0.44
UBE3B-209ENST00000539584 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
UBE3B-209ENST00000539584 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
UBE3B-209ENST00000539584 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
UBE3B-209ENST00000539584 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
UBE3B-209ENST00000539584 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
UBE3B-209ENST00000539584 LAMC1P11047 1609 aa17.74■□□□□ 0.43
UBE3B-209ENST00000539584 PARD3Q8TEW0 1356 aa17.73■□□□□ 0.43
UBE3B-209ENST00000539584 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
UBE3B-209ENST00000539584 FAM135AQ9P2D6 1515 aa17.72■□□□□ 0.43
UBE3B-209ENST00000539584 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
UBE3B-209ENST00000539584 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
UBE3B-209ENST00000539584 CCDC144AA2RUR9 1427 aa17.71■□□□□ 0.43
UBE3B-209ENST00000539584 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.42
UBE3B-209ENST00000539584 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
UBE3B-209ENST00000539584 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
UBE3B-209ENST00000539584 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
UBE3B-209ENST00000539584 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
UBE3B-209ENST00000539584 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
UBE3B-209ENST00000539584 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
UBE3B-209ENST00000539584 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
UBE3B-209ENST00000539584 UNC13BO14795 1591 aa17.66■□□□□ 0.42
UBE3B-209ENST00000539584 PLEKHH2Q8IVE3 1493 aa17.66■□□□□ 0.42
UBE3B-209ENST00000539584 EIF2AK4Q9P2K8 1649 aaKnown RBP17.66■□□□□ 0.42
UBE3B-209ENST00000539584 MS4A1P11836 297 aa17.65■□□□□ 0.42
UBE3B-209ENST00000539584 ATP10AO60312 1499 aa17.65■□□□□ 0.42
UBE3B-209ENST00000539584 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-209ENST00000539584 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.42
UBE3B-209ENST00000539584 HNRNPMP52272 730 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBE3B-209ENST00000539584 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-209ENST00000539584 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
UBE3B-209ENST00000539584 FBLN2P98095 1184 aa17.64■□□□□ 0.41
UBE3B-209ENST00000539584 PRDM15P57071 1507 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-209ENST00000539584 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-209ENST00000539584 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
UBE3B-209ENST00000539584 PLXNC1O60486 1568 aa17.61■□□□□ 0.41
UBE3B-209ENST00000539584 CDC42BPBQ9Y5S2 1711 aa17.6■□□□□ 0.41
UBE3B-209ENST00000539584 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
UBE3B-209ENST00000539584 IQGAP3Q86VI3 1631 aa17.6■□□□□ 0.41
UBE3B-209ENST00000539584 A2MP01023 1474 aa17.58■□□□□ 0.41
UBE3B-209ENST00000539584 PLA2R1Q13018 1463 aa17.58■□□□□ 0.4
UBE3B-209ENST00000539584 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
UBE3B-209ENST00000539584 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
UBE3B-209ENST00000539584 TMF1P82094 1093 aa17.57■□□□□ 0.4
UBE3B-209ENST00000539584 TESK2Q96S53 571 aa17.57■□□□□ 0.4
UBE3B-209ENST00000539584 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
UBE3B-209ENST00000539584 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
UBE3B-209ENST00000539584 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
UBE3B-209ENST00000539584 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
UBE3B-209ENST00000539584 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-209ENST00000539584 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
UBE3B-209ENST00000539584 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
UBE3B-209ENST00000539584 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
UBE3B-209ENST00000539584 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
UBE3B-209ENST00000539584 PDE4AP27815 886 aa17.52■□□□□ 0.39
UBE3B-209ENST00000539584 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.39
UBE3B-209ENST00000539584 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
UBE3B-209ENST00000539584 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
UBE3B-209ENST00000539584 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
UBE3B-209ENST00000539584 PANK3Q9H999 370 aa17.5■□□□□ 0.39
UBE3B-209ENST00000539584 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
UBE3B-209ENST00000539584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBE3B-209ENST00000539584 MYO5CQ9NQX4 1742 aa17.48■□□□□ 0.39
UBE3B-209ENST00000539584 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
UBE3B-209ENST00000539584 NBR1Q14596 966 aa17.48■□□□□ 0.39
UBE3B-209ENST00000539584 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
UBE3B-209ENST00000539584 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
UBE3B-209ENST00000539584 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
UBE3B-209ENST00000539584 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-209ENST00000539584 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
UBE3B-209ENST00000539584 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
UBE3B-209ENST00000539584 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
UBE3B-209ENST00000539584 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
UBE3B-209ENST00000539584 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
UBE3B-209ENST00000539584 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
UBE3B-209ENST00000539584 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
UBE3B-209ENST00000539584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBE3B-209ENST00000539584 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
UBE3B-209ENST00000539584 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-209ENST00000539584 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
UBE3B-209ENST00000539584 PLCH2O75038 1416 aa17.42■□□□□ 0.38
UBE3B-209ENST00000539584 SYNMO15061 1565 aa17.42■□□□□ 0.38
UBE3B-209ENST00000539584 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
UBE3B-209ENST00000539584 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
UBE3B-209ENST00000539584 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
UBE3B-209ENST00000539584 CENPQQ7L2Z9 268 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-209ENST00000539584 IQGAP1P46940 1657 aa17.4■□□□□ 0.38
UBE3B-209ENST00000539584 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBE3B-209ENST00000539584 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
UBE3B-209ENST00000539584 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.38
UBE3B-209ENST00000539584 NEURL4Q96JN8 1562 aa17.39■□□□□ 0.37
UBE3B-209ENST00000539584 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
UBE3B-209ENST00000539584 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms