RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
USP44-203ENST00000537435 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
USP44-203ENST00000537435 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
USP44-203ENST00000537435 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.69
USP44-203ENST00000537435 FANCIQ9NVI1 1328 aa19.39■□□□□ 0.69
USP44-203ENST00000537435 MSH5O43196 834 aa19.38■□□□□ 0.69
USP44-203ENST00000537435 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
USP44-203ENST00000537435 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
USP44-203ENST00000537435 TTC37Q6PGP7 1564 aa19.37■□□□□ 0.69
USP44-203ENST00000537435 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
USP44-203ENST00000537435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
USP44-203ENST00000537435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP44-203ENST00000537435 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
USP44-203ENST00000537435 RALBP1Q15311 655 aa19.36■□□□□ 0.69
USP44-203ENST00000537435 MAST1Q9Y2H9 1570 aa19.36■□□□□ 0.69
USP44-203ENST00000537435 KTN1Q86UP2 1357 aaKnown RBP19.36■□□□□ 0.69
USP44-203ENST00000537435 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
USP44-203ENST00000537435 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
USP44-203ENST00000537435 RNF123Q5XPI4 1314 aa19.34■□□□□ 0.69
USP44-203ENST00000537435 UNC13BO14795 1591 aa19.34■□□□□ 0.69
USP44-203ENST00000537435 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
USP44-203ENST00000537435 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.69
USP44-203ENST00000537435 CHD1O14646 1710 aa19.33■□□□□ 0.69
USP44-203ENST00000537435 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.68
USP44-203ENST00000537435 E9PCH4 1651 aa19.32■□□□□ 0.68
USP44-203ENST00000537435 PLEKHH2Q8IVE3 1493 aa19.32■□□□□ 0.68
USP44-203ENST00000537435 A2MP01023 1474 aa19.31■□□□□ 0.68
USP44-203ENST00000537435 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
USP44-203ENST00000537435 GPRASP1Q5JY77 1395 aa19.3■□□□□ 0.68
USP44-203ENST00000537435 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
USP44-203ENST00000537435 PLXNC1O60486 1568 aa19.29■□□□□ 0.68
USP44-203ENST00000537435 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
USP44-203ENST00000537435 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
USP44-203ENST00000537435 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.67
USP44-203ENST00000537435 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
USP44-203ENST00000537435 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
USP44-203ENST00000537435 DUOX2Q9NRD8 1548 aa19.26■□□□□ 0.67
USP44-203ENST00000537435 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
USP44-203ENST00000537435 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
USP44-203ENST00000537435 CCDC136Q96JN2 1154 aa19.24■□□□□ 0.67
USP44-203ENST00000537435 TESK2Q96S53 571 aa19.24■□□□□ 0.67
USP44-203ENST00000537435 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
USP44-203ENST00000537435 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
USP44-203ENST00000537435 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
USP44-203ENST00000537435 PLCH2O75038 1416 aa19.23■□□□□ 0.67
USP44-203ENST00000537435 LAMC1P11047 1609 aa19.22■□□□□ 0.67
USP44-203ENST00000537435 ATP10AO60312 1499 aa19.22■□□□□ 0.67
USP44-203ENST00000537435 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
USP44-203ENST00000537435 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
USP44-203ENST00000537435 ERICH6Q7L0X2 663 aa19.2■□□□□ 0.66
USP44-203ENST00000537435 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
USP44-203ENST00000537435 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
USP44-203ENST00000537435 TMF1P82094 1093 aa19.18■□□□□ 0.66
USP44-203ENST00000537435 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
USP44-203ENST00000537435 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
USP44-203ENST00000537435 PANK3Q9H999 370 aa19.17■□□□□ 0.66
USP44-203ENST00000537435 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
USP44-203ENST00000537435 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
USP44-203ENST00000537435 ABCC1P33527 1531 aa19.15■□□□□ 0.66
USP44-203ENST00000537435 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
USP44-203ENST00000537435 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
USP44-203ENST00000537435 RCAN3Q9UKA8 241 aa19.13■□□□□ 0.65
USP44-203ENST00000537435 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
USP44-203ENST00000537435 SPAG9O60271 1321 aaKnown RBP19.11■□□□□ 0.65
USP44-203ENST00000537435 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
USP44-203ENST00000537435 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
USP44-203ENST00000537435 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
USP44-203ENST00000537435 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
USP44-203ENST00000537435 INSRP06213 1382 aa19.07■□□□□ 0.64
USP44-203ENST00000537435 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
USP44-203ENST00000537435 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
USP44-203ENST00000537435 RTEL1-TNFRSF6BF6WH68 1400 aa19.06■□□□□ 0.64
USP44-203ENST00000537435 MADDQ8WXG6 1647 aa19.05■□□□□ 0.64
USP44-203ENST00000537435 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
USP44-203ENST00000537435 TRPM2O94759 1503 aa19.04■□□□□ 0.64
USP44-203ENST00000537435 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
USP44-203ENST00000537435 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
USP44-203ENST00000537435 PTPRTO14522 1441 aa19.03■□□□□ 0.64
USP44-203ENST00000537435 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.63
USP44-203ENST00000537435 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
USP44-203ENST00000537435 STAC3Q96MF2 364 aa19.01■□□□□ 0.63
USP44-203ENST00000537435 NOP58Q9Y2X3 529 aaKnown RBP19.01■□□□□ 0.63
USP44-203ENST00000537435 IQGAP1P46940 1657 aa19■□□□□ 0.63
USP44-203ENST00000537435 SCAF11Q99590 1463 aaKnown RBP19■□□□□ 0.63
USP44-203ENST00000537435 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
USP44-203ENST00000537435 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
USP44-203ENST00000537435 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
USP44-203ENST00000537435 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
USP44-203ENST00000537435 SPHKAPQ2M3C7 1700 aa18.98■□□□□ 0.63
USP44-203ENST00000537435 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
USP44-203ENST00000537435 ANP32AP39687 249 aaKnown RBP18.98■□□□□ 0.63
USP44-203ENST00000537435 AMER1Q5JTC6 1135 aaPredicted RBP18.98■□□□□ 0.63
USP44-203ENST00000537435 CEP152O94986 1710 aa18.98■□□□□ 0.63
USP44-203ENST00000537435 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
USP44-203ENST00000537435 KANK1Q14678 1352 aa18.97■□□□□ 0.63
USP44-203ENST00000537435 PLIN1O60240 522 aa18.96■□□□□ 0.63
USP44-203ENST00000537435 KIF3BO15066 747 aa18.95■□□□□ 0.62
USP44-203ENST00000537435 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
USP44-203ENST00000537435 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
USP44-203ENST00000537435 TET3O43151 1660 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms