RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.44
LGR5-202ENST00000536515 UHRF1BP1Q6BDS2 1440 aa17.83■□□□□ 0.44
LGR5-202ENST00000536515 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
LGR5-202ENST00000536515 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
LGR5-202ENST00000536515 MYO5CQ9NQX4 1742 aa17.82■□□□□ 0.44
LGR5-202ENST00000536515 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
LGR5-202ENST00000536515 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
LGR5-202ENST00000536515 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
LGR5-202ENST00000536515 MSH5O43196 834 aa17.8■□□□□ 0.44
LGR5-202ENST00000536515 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
LGR5-202ENST00000536515 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
LGR5-202ENST00000536515 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
LGR5-202ENST00000536515 DCAF11Q8TEB1 546 aa17.79■□□□□ 0.44
LGR5-202ENST00000536515 KDM5DQ9BY66 1539 aa17.78■□□□□ 0.44
LGR5-202ENST00000536515 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
LGR5-202ENST00000536515 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
LGR5-202ENST00000536515 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
LGR5-202ENST00000536515 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
LGR5-202ENST00000536515 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
LGR5-202ENST00000536515 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.43
LGR5-202ENST00000536515 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
LGR5-202ENST00000536515 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
LGR5-202ENST00000536515 PLCH2O75038 1416 aa17.75■□□□□ 0.43
LGR5-202ENST00000536515 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
LGR5-202ENST00000536515 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
LGR5-202ENST00000536515 ARHGEF5Q12774 1597 aa17.74■□□□□ 0.43
LGR5-202ENST00000536515 CCDC141Q6ZP82 1450 aa17.72■□□□□ 0.43
LGR5-202ENST00000536515 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
LGR5-202ENST00000536515 SAMD9LQ8IVG5 1584 aa17.71■□□□□ 0.43
LGR5-202ENST00000536515 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
LGR5-202ENST00000536515 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.42
LGR5-202ENST00000536515 FAM135AQ9P2D6 1515 aa17.7■□□□□ 0.42
LGR5-202ENST00000536515 PPRC1Q5VV67 1664 aaKnown RBP17.68■□□□□ 0.42
LGR5-202ENST00000536515 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
LGR5-202ENST00000536515 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
LGR5-202ENST00000536515 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
LGR5-202ENST00000536515 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
LGR5-202ENST00000536515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.429e-7■□□□□ 10.3
LGR5-202ENST00000536515 FANCAO15360 1455 aa17.66■□□□□ 0.42
LGR5-202ENST00000536515 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
LGR5-202ENST00000536515 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
LGR5-202ENST00000536515 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
LGR5-202ENST00000536515 RALBP1Q15311 655 aa17.65■□□□□ 0.42
LGR5-202ENST00000536515 NEO1Q92859 1461 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 ABCC1P33527 1531 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
LGR5-202ENST00000536515 LRPPRCP42704 1394 aaKnown RBP17.64■□□□□ 0.41
LGR5-202ENST00000536515 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
LGR5-202ENST00000536515 E9PCH4 1651 aa17.62■□□□□ 0.41
LGR5-202ENST00000536515 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
LGR5-202ENST00000536515 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
LGR5-202ENST00000536515 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
LGR5-202ENST00000536515 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
LGR5-202ENST00000536515 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
LGR5-202ENST00000536515 A2MP01023 1474 aa17.58■□□□□ 0.4
LGR5-202ENST00000536515 ADGRL1O94910 1474 aa17.58■□□□□ 0.4
LGR5-202ENST00000536515 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
LGR5-202ENST00000536515 UNC13BO14795 1591 aa17.57■□□□□ 0.4
LGR5-202ENST00000536515 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
LGR5-202ENST00000536515 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
LGR5-202ENST00000536515 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
LGR5-202ENST00000536515 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
LGR5-202ENST00000536515 PER1O15534 1290 aaPredicted RBP17.55■□□□□ 0.4
LGR5-202ENST00000536515 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
LGR5-202ENST00000536515 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
LGR5-202ENST00000536515 TESK2Q96S53 571 aa17.53■□□□□ 0.4
LGR5-202ENST00000536515 SCAPERQ9BY12 1400 aa17.52■□□□□ 0.4
LGR5-202ENST00000536515 COL17A1Q9UMD9 1497 aaPredicted RBP17.52■□□□□ 0.39
LGR5-202ENST00000536515 IQGAP3Q86VI3 1631 aa17.52■□□□□ 0.39
LGR5-202ENST00000536515 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.39
LGR5-202ENST00000536515 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
LGR5-202ENST00000536515 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
LGR5-202ENST00000536515 RICTORQ6R327 1708 aa17.51■□□□□ 0.39
LGR5-202ENST00000536515 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
LGR5-202ENST00000536515 PRDM15P57071 1507 aaPredicted RBP17.5■□□□□ 0.39
LGR5-202ENST00000536515 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
LGR5-202ENST00000536515 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
LGR5-202ENST00000536515 RCAN3Q9UKA8 241 aa17.49■□□□□ 0.39
LGR5-202ENST00000536515 PANK3Q9H999 370 aa17.49■□□□□ 0.39
LGR5-202ENST00000536515 DUOX2Q9NRD8 1548 aa17.49■□□□□ 0.39
LGR5-202ENST00000536515 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
LGR5-202ENST00000536515 FRMPD1Q5SYB0 1578 aa17.48■□□□□ 0.39
LGR5-202ENST00000536515 LAMC1P11047 1609 aa17.48■□□□□ 0.39
LGR5-202ENST00000536515 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
LGR5-202ENST00000536515 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
LGR5-202ENST00000536515 TMF1P82094 1093 aa17.46■□□□□ 0.39
LGR5-202ENST00000536515 CDCA7LQ96GN5 454 aa17.46■□□□□ 0.39
LGR5-202ENST00000536515 EIF2AK4Q9P2K8 1649 aaKnown RBP17.46■□□□□ 0.39
LGR5-202ENST00000536515 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 ATP10AO60312 1499 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
LGR5-202ENST00000536515 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
LGR5-202ENST00000536515 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms