RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
SSH3-210ENST00000532881 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
SSH3-210ENST00000532881 ARHGAP5Q13017 1502 aa20.17■□□□□ 0.82
SSH3-210ENST00000532881 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
SSH3-210ENST00000532881 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
SSH3-210ENST00000532881 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
SSH3-210ENST00000532881 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
SSH3-210ENST00000532881 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
SSH3-210ENST00000532881 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
SSH3-210ENST00000532881 ARHGEF5Q12774 1597 aa20.13■□□□□ 0.81
SSH3-210ENST00000532881 ARID4BQ4LE39 1312 aaPredicted RBP20.13■□□□□ 0.81
SSH3-210ENST00000532881 CHD1O14646 1710 aa20.13■□□□□ 0.81
SSH3-210ENST00000532881 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
SSH3-210ENST00000532881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
SSH3-210ENST00000532881 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
SSH3-210ENST00000532881 PREX2Q70Z35 1606 aa20.12■□□□□ 0.81
SSH3-210ENST00000532881 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
SSH3-210ENST00000532881 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
SSH3-210ENST00000532881 DISP3Q9P2K9 1392 aa20.09■□□□□ 0.81
SSH3-210ENST00000532881 A2MP01023 1474 aa20.08■□□□□ 0.81
SSH3-210ENST00000532881 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
SSH3-210ENST00000532881 PER1O15534 1290 aaPredicted RBP20.06■□□□□ 0.8
SSH3-210ENST00000532881 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
SSH3-210ENST00000532881 RSPH4AQ5TD94 716 aa20.05■□□□□ 0.8
SSH3-210ENST00000532881 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
SSH3-210ENST00000532881 TESK2Q96S53 571 aa20.05■□□□□ 0.8
SSH3-210ENST00000532881 PANK3Q9H999 370 aa20.05■□□□□ 0.8
SSH3-210ENST00000532881 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
SSH3-210ENST00000532881 RALBP1Q15311 655 aa20.04■□□□□ 0.8
SSH3-210ENST00000532881 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
SSH3-210ENST00000532881 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
SSH3-210ENST00000532881 BRD4O60885 1362 aaPredicted RBP20.02■□□□□ 0.8
SSH3-210ENST00000532881 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
SSH3-210ENST00000532881 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
SSH3-210ENST00000532881 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
SSH3-210ENST00000532881 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
SSH3-210ENST00000532881 NLRP13Q86W25 1043 aa19.99■□□□□ 0.79
SSH3-210ENST00000532881 E9PCH4 1651 aa19.98■□□□□ 0.79
SSH3-210ENST00000532881 PLIN1O60240 522 aa19.98■□□□□ 0.79
SSH3-210ENST00000532881 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
SSH3-210ENST00000532881 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
SSH3-210ENST00000532881 ABCC2Q92887 1545 aa19.96■□□□□ 0.79
SSH3-210ENST00000532881 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
SSH3-210ENST00000532881 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
SSH3-210ENST00000532881 UNC13BO14795 1591 aa19.95■□□□□ 0.78
SSH3-210ENST00000532881 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
SSH3-210ENST00000532881 SKAP1Q86WV1 359 aa19.94■□□□□ 0.78
SSH3-210ENST00000532881 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
SSH3-210ENST00000532881 RRP1P56182 461 aaKnown RBP19.93■□□□□ 0.78
SSH3-210ENST00000532881 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
SSH3-210ENST00000532881 GPRASP1Q5JY77 1395 aa19.92■□□□□ 0.78
SSH3-210ENST00000532881 TMF1P82094 1093 aa19.92■□□□□ 0.78
SSH3-210ENST00000532881 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
SSH3-210ENST00000532881 PLCH2O75038 1416 aa19.92■□□□□ 0.78
SSH3-210ENST00000532881 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
SSH3-210ENST00000532881 PAK3O75914 559 aaPredicted RBP19.91■□□□□ 0.78
SSH3-210ENST00000532881 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
SSH3-210ENST00000532881 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
SSH3-210ENST00000532881 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
SSH3-210ENST00000532881 PRDM15P57071 1507 aaPredicted RBP19.89■□□□□ 0.77
SSH3-210ENST00000532881 DUOX2Q9NRD8 1548 aa19.89■□□□□ 0.77
SSH3-210ENST00000532881 ZCCHC11Q5TAX3 1644 aaKnown RBP19.88■□□□□ 0.77
SSH3-210ENST00000532881 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
SSH3-210ENST00000532881 PLXNC1O60486 1568 aa19.87■□□□□ 0.77
SSH3-210ENST00000532881 MAGI2Q86UL8 1455 aa19.85■□□□□ 0.77
SSH3-210ENST00000532881 KIF3BO15066 747 aa19.85■□□□□ 0.77
SSH3-210ENST00000532881 NBR1Q14596 966 aa19.83■□□□□ 0.76
SSH3-210ENST00000532881 ABCC1P33527 1531 aa19.82■□□□□ 0.76
SSH3-210ENST00000532881 C20orf194Q5TEA3 1177 aa19.82■□□□□ 0.76
SSH3-210ENST00000532881 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
SSH3-210ENST00000532881 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
SSH3-210ENST00000532881 CFAP70Q5T0N1 1121 aa19.8■□□□□ 0.76
SSH3-210ENST00000532881 ATP10AO60312 1499 aa19.8■□□□□ 0.76
SSH3-210ENST00000532881 PPP2R1AP30153 589 aa19.8■□□□□ 0.76
SSH3-210ENST00000532881 CCDC146Q8IYE0 955 aa19.79■□□□□ 0.76
SSH3-210ENST00000532881 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
SSH3-210ENST00000532881 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
SSH3-210ENST00000532881 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
SSH3-210ENST00000532881 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
SSH3-210ENST00000532881 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
SSH3-210ENST00000532881 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
SSH3-210ENST00000532881 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.76
SSH3-210ENST00000532881 ADGRF5Q8IZF2 1346 aa19.75■□□□□ 0.75
SSH3-210ENST00000532881 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
SSH3-210ENST00000532881 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
SSH3-210ENST00000532881 CLTCL1P53675 1640 aa19.74■□□□□ 0.75
SSH3-210ENST00000532881 PDE3BQ13370 1112 aa19.74■□□□□ 0.75
SSH3-210ENST00000532881 MADDQ8WXG6 1647 aa19.74■□□□□ 0.75
SSH3-210ENST00000532881 WASHC2CQ9Y4E1 1318 aa19.74■□□□□ 0.75
SSH3-210ENST00000532881 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
SSH3-210ENST00000532881 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
SSH3-210ENST00000532881 ZFYVE16Q7Z3T8 1539 aa19.73■□□□□ 0.75
SSH3-210ENST00000532881 LAMC1P11047 1609 aa19.73■□□□□ 0.75
SSH3-210ENST00000532881 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
SSH3-210ENST00000532881 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
SSH3-210ENST00000532881 RNF17Q9BXT8 1623 aaKnown RBP19.71■□□□□ 0.75
SSH3-210ENST00000532881 FANCAO15360 1455 aa19.7■□□□□ 0.74
SSH3-210ENST00000532881 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
SSH3-210ENST00000532881 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
SSH3-210ENST00000532881 IPO9Q96P70 1041 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms