RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 FOXD4L6Q3SYB3 417 aaPredicted RBP13.84□□□□□ -0.19
CHEK1-213ENST00000532449 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
CHEK1-213ENST00000532449 FOXD4L3Q6VB84 417 aaPredicted RBP13.84□□□□□ -0.19
CHEK1-213ENST00000532449 NAIPQ13075 1403 aa13.84□□□□□ -0.19
CHEK1-213ENST00000532449 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
CHEK1-213ENST00000532449 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
CHEK1-213ENST00000532449 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
CHEK1-213ENST00000532449 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.28e-7■□□□□ 8.6
CHEK1-213ENST00000532449 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
CHEK1-213ENST00000532449 STK26Q9P289 416 aa13.82□□□□□ -0.2
CHEK1-213ENST00000532449 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
CHEK1-213ENST00000532449 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
CHEK1-213ENST00000532449 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
CHEK1-213ENST00000532449 MORC1Q86VD1 984 aa13.8□□□□□ -0.2
CHEK1-213ENST00000532449 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
CHEK1-213ENST00000532449 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
CHEK1-213ENST00000532449 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
CHEK1-213ENST00000532449 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
CHEK1-213ENST00000532449 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
CHEK1-213ENST00000532449 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
CHEK1-213ENST00000532449 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.2
CHEK1-213ENST00000532449 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.21
CHEK1-213ENST00000532449 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
CHEK1-213ENST00000532449 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
CHEK1-213ENST00000532449 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
CHEK1-213ENST00000532449 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
CHEK1-213ENST00000532449 MPNDQ8N594 471 aa13.75□□□□□ -0.21
CHEK1-213ENST00000532449 MS4A1P11836 297 aa13.75□□□□□ -0.21
CHEK1-213ENST00000532449 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
CHEK1-213ENST00000532449 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
CHEK1-213ENST00000532449 PDE3BQ13370 1112 aa13.75□□□□□ -0.21
CHEK1-213ENST00000532449 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
CHEK1-213ENST00000532449 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
CHEK1-213ENST00000532449 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
CHEK1-213ENST00000532449 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
CHEK1-213ENST00000532449 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
CHEK1-213ENST00000532449 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
CHEK1-213ENST00000532449 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
CHEK1-213ENST00000532449 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
CHEK1-213ENST00000532449 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
CHEK1-213ENST00000532449 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
CHEK1-213ENST00000532449 MYH16Q9H6N6 1097 aa13.71□□□□□ -0.21
CHEK1-213ENST00000532449 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.21
CHEK1-213ENST00000532449 HSP90AA2PQ14568 343 aaPredicted RBP13.71□□□□□ -0.22
CHEK1-213ENST00000532449 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
CHEK1-213ENST00000532449 LNPKQ9C0E8 428 aa13.7□□□□□ -0.22
CHEK1-213ENST00000532449 GGT6Q6P531 493 aa13.7□□□□□ -0.22
CHEK1-213ENST00000532449 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
CHEK1-213ENST00000532449 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
CHEK1-213ENST00000532449 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
CHEK1-213ENST00000532449 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
CHEK1-213ENST00000532449 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
CHEK1-213ENST00000532449 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
CHEK1-213ENST00000532449 SEC24BO95487 1268 aa13.67□□□□□ -0.22
CHEK1-213ENST00000532449 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
CHEK1-213ENST00000532449 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
CHEK1-213ENST00000532449 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
CHEK1-213ENST00000532449 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
CHEK1-213ENST00000532449 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
CHEK1-213ENST00000532449 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
CHEK1-213ENST00000532449 IGHDP01880 384 aa13.65□□□□□ -0.22
CHEK1-213ENST00000532449 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
CHEK1-213ENST00000532449 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
CHEK1-213ENST00000532449 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
CHEK1-213ENST00000532449 KIF3BO15066 747 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
CHEK1-213ENST00000532449 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
CHEK1-213ENST00000532449 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
CHEK1-213ENST00000532449 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
CHEK1-213ENST00000532449 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
CHEK1-213ENST00000532449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■■ 28.9
CHEK1-213ENST00000532449 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
CHEK1-213ENST00000532449 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
CHEK1-213ENST00000532449 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
CHEK1-213ENST00000532449 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
CHEK1-213ENST00000532449 TRAK2O60296 914 aa13.6□□□□□ -0.23
CHEK1-213ENST00000532449 C22orf23Q9BZE7 217 aa13.6□□□□□ -0.23
CHEK1-213ENST00000532449 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
CHEK1-213ENST00000532449 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
CHEK1-213ENST00000532449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
CHEK1-213ENST00000532449 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
CHEK1-213ENST00000532449 E9PSI1 815 aa13.59□□□□□ -0.23
CHEK1-213ENST00000532449 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
CHEK1-213ENST00000532449 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
CHEK1-213ENST00000532449 ZNF428Q96B54 188 aa13.59□□□□□ -0.23
CHEK1-213ENST00000532449 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
CHEK1-213ENST00000532449 IFT140Q96RY7 1462 aa13.58□□□□□ -0.24
CHEK1-213ENST00000532449 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
CHEK1-213ENST00000532449 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
CHEK1-213ENST00000532449 MTHFSP49914 203 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
CHEK1-213ENST00000532449 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms