RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-206ENST00000530277 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
SCN3B-206ENST00000530277 KANK1Q14678 1352 aa15.97■□□□□ 0.15
SCN3B-206ENST00000530277 PDE4AP27815 886 aa15.97■□□□□ 0.15
SCN3B-206ENST00000530277 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
SCN3B-206ENST00000530277 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
SCN3B-206ENST00000530277 GRIN2BQ13224 1484 aa15.96■□□□□ 0.15
SCN3B-206ENST00000530277 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
SCN3B-206ENST00000530277 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.15
SCN3B-206ENST00000530277 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
SCN3B-206ENST00000530277 EPRSP07814 1512 aaKnown RBP15.96■□□□□ 0.14
SCN3B-206ENST00000530277 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.14
SCN3B-206ENST00000530277 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
SCN3B-206ENST00000530277 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
SCN3B-206ENST00000530277 PLB1Q6P1J6 1458 aa15.95■□□□□ 0.14
SCN3B-206ENST00000530277 WASHC2CQ9Y4E1 1318 aa15.95■□□□□ 0.14
SCN3B-206ENST00000530277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCN3B-206ENST00000530277 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
SCN3B-206ENST00000530277 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
SCN3B-206ENST00000530277 MSH5O43196 834 aa15.94■□□□□ 0.14
SCN3B-206ENST00000530277 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
SCN3B-206ENST00000530277 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
SCN3B-206ENST00000530277 DAPK1P53355 1430 aa15.93■□□□□ 0.14
SCN3B-206ENST00000530277 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
SCN3B-206ENST00000530277 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
SCN3B-206ENST00000530277 ANKRD30BQ9BXX2 1392 aa15.9■□□□□ 0.14
SCN3B-206ENST00000530277 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
SCN3B-206ENST00000530277 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
SCN3B-206ENST00000530277 ITPRIPQ8IWB1 547 aa15.89■□□□□ 0.13
SCN3B-206ENST00000530277 GZF1Q9H116 711 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-206ENST00000530277 BECN1Q14457 450 aa15.88■□□□□ 0.13
SCN3B-206ENST00000530277 MINK1Q8N4C8 1332 aaPredicted RBP15.88■□□□□ 0.13
SCN3B-206ENST00000530277 ABCC5O15440 1437 aa15.88■□□□□ 0.13
SCN3B-206ENST00000530277 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
SCN3B-206ENST00000530277 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
SCN3B-206ENST00000530277 C9orf84Q5VXU9 1444 aa15.86■□□□□ 0.13
SCN3B-206ENST00000530277 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
SCN3B-206ENST00000530277 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-206ENST00000530277 PANK1Q8TE04 598 aa15.86■□□□□ 0.13
SCN3B-206ENST00000530277 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
SCN3B-206ENST00000530277 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
SCN3B-206ENST00000530277 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
SCN3B-206ENST00000530277 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
SCN3B-206ENST00000530277 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
SCN3B-206ENST00000530277 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
SCN3B-206ENST00000530277 FANCIQ9NVI1 1328 aa15.84■□□□□ 0.13
SCN3B-206ENST00000530277 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
SCN3B-206ENST00000530277 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
SCN3B-206ENST00000530277 MIA2Q96PC5 1412 aa15.83■□□□□ 0.13
SCN3B-206ENST00000530277 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.13
SCN3B-206ENST00000530277 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
SCN3B-206ENST00000530277 C20orf194Q5TEA3 1177 aa15.83■□□□□ 0.12
SCN3B-206ENST00000530277 SUPT6HQ7KZ85 1726 aaKnown RBP15.83■□□□□ 0.12
SCN3B-206ENST00000530277 BCAR3O75815 825 aa15.83■□□□□ 0.12
SCN3B-206ENST00000530277 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
SCN3B-206ENST00000530277 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
SCN3B-206ENST00000530277 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
SCN3B-206ENST00000530277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCN3B-206ENST00000530277 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
SCN3B-206ENST00000530277 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
SCN3B-206ENST00000530277 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
SCN3B-206ENST00000530277 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
SCN3B-206ENST00000530277 A0A0G2JS52 829 aa15.77■□□□□ 0.12
SCN3B-206ENST00000530277 NCOA1Q15788 1441 aa15.77■□□□□ 0.12
SCN3B-206ENST00000530277 MTHFSP49914 203 aa15.77■□□□□ 0.11
SCN3B-206ENST00000530277 IL27Q8NEV9 243 aa15.76■□□□□ 0.11
SCN3B-206ENST00000530277 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
SCN3B-206ENST00000530277 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-206ENST00000530277 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
SCN3B-206ENST00000530277 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-206ENST00000530277 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
SCN3B-206ENST00000530277 HMOX1P09601 288 aa15.74■□□□□ 0.11
SCN3B-206ENST00000530277 KIAA0586Q9BVV6 1533 aa15.74■□□□□ 0.11
SCN3B-206ENST00000530277 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
SCN3B-206ENST00000530277 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
SCN3B-206ENST00000530277 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
SCN3B-206ENST00000530277 HSP90AB1P08238 724 aaKnown RBP15.73■□□□□ 0.11
SCN3B-206ENST00000530277 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
SCN3B-206ENST00000530277 LTV1Q96GA3 475 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-206ENST00000530277 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
SCN3B-206ENST00000530277 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
SCN3B-206ENST00000530277 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-206ENST00000530277 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
SCN3B-206ENST00000530277 E9PSI1 815 aa15.71■□□□□ 0.11
SCN3B-206ENST00000530277 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
SCN3B-206ENST00000530277 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
SCN3B-206ENST00000530277 ANP32BQ92688 251 aaKnown RBP15.71■□□□□ 0.11
SCN3B-206ENST00000530277 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
SCN3B-206ENST00000530277 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
SCN3B-206ENST00000530277 SLC4A10Q6U841 1118 aa15.7■□□□□ 0.1
SCN3B-206ENST00000530277 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
SCN3B-206ENST00000530277 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
SCN3B-206ENST00000530277 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
SCN3B-206ENST00000530277 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
SCN3B-206ENST00000530277 RIPK4P57078 832 aa15.67■□□□□ 0.1
SCN3B-206ENST00000530277 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
SCN3B-206ENST00000530277 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
SCN3B-206ENST00000530277 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-206ENST00000530277 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
SCN3B-206ENST00000530277 CUL7Q14999 1698 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms