RNA–Protein interactions for RNA: ENST00000529991.1

MS4A4A-205, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-205ENST00000529991 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
MS4A4A-205ENST00000529991 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
MS4A4A-205ENST00000529991 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
MS4A4A-205ENST00000529991 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
MS4A4A-205ENST00000529991 GPIHBP1Q8IV16 184 aa11.44□□□□□ -0.58
MS4A4A-205ENST00000529991 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
MS4A4A-205ENST00000529991 NUDT7P0C024 238 aa11.43□□□□□ -0.58
MS4A4A-205ENST00000529991 OSBPP22059 807 aa11.43□□□□□ -0.58
MS4A4A-205ENST00000529991 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
MS4A4A-205ENST00000529991 PTGER2P43116 358 aa11.42□□□□□ -0.58
MS4A4A-205ENST00000529991 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
MS4A4A-205ENST00000529991 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
MS4A4A-205ENST00000529991 LHX8Q68G74 356 aa11.41□□□□□ -0.58
MS4A4A-205ENST00000529991 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
MS4A4A-205ENST00000529991 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
MS4A4A-205ENST00000529991 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
MS4A4A-205ENST00000529991 GPR153Q6NV75 609 aa11.38□□□□□ -0.59
MS4A4A-205ENST00000529991 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
MS4A4A-205ENST00000529991 CUX1P39880 1505 aa11.38□□□□□ -0.59
MS4A4A-205ENST00000529991 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
MS4A4A-205ENST00000529991 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
MS4A4A-205ENST00000529991 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
MS4A4A-205ENST00000529991 ZMYND10O75800 440 aa11.36□□□□□ -0.59
MS4A4A-205ENST00000529991 PCDHGA10Q9Y5H3 936 aa11.36□□□□□ -0.59
MS4A4A-205ENST00000529991 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
MS4A4A-205ENST00000529991 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
MS4A4A-205ENST00000529991 SOGA1O94964 1423 aa11.35□□□□□ -0.59
MS4A4A-205ENST00000529991 PHF14O94880 888 aa11.34□□□□□ -0.59
MS4A4A-205ENST00000529991 GPR37O15354 613 aa11.33□□□□□ -0.6
MS4A4A-205ENST00000529991 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
MS4A4A-205ENST00000529991 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
MS4A4A-205ENST00000529991 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
MS4A4A-205ENST00000529991 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
MS4A4A-205ENST00000529991 MAP3K7O43318 606 aa11.32□□□□□ -0.6
MS4A4A-205ENST00000529991 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
MS4A4A-205ENST00000529991 SNPHO15079 494 aa11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 TSR1Q2NL82 804 aaKnown RBP11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
MS4A4A-205ENST00000529991 JPH4Q96JJ6 628 aa11.3□□□□□ -0.6
MS4A4A-205ENST00000529991 EPAS1Q99814 870 aa11.3□□□□□ -0.6
MS4A4A-205ENST00000529991 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
MS4A4A-205ENST00000529991 FOSBP53539 338 aa11.29□□□□□ -0.6
MS4A4A-205ENST00000529991 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
MS4A4A-205ENST00000529991 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
MS4A4A-205ENST00000529991 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
MS4A4A-205ENST00000529991 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
MS4A4A-205ENST00000529991 TOP2BQ02880 1626 aa11.27□□□□□ -0.6
MS4A4A-205ENST00000529991 FECHP22830 423 aa11.27□□□□□ -0.61
MS4A4A-205ENST00000529991 FCHSD2O94868 740 aa11.26□□□□□ -0.61
MS4A4A-205ENST00000529991 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
MS4A4A-205ENST00000529991 EIF4G3O43432 1585 aaKnown RBP11.25□□□□□ -0.61
MS4A4A-205ENST00000529991 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
MS4A4A-205ENST00000529991 PTGDRQ13258 359 aa11.25□□□□□ -0.61
MS4A4A-205ENST00000529991 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
MS4A4A-205ENST00000529991 ADAM33Q9BZ11 813 aa11.25□□□□□ -0.61
MS4A4A-205ENST00000529991 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
MS4A4A-205ENST00000529991 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
MS4A4A-205ENST00000529991 GNPATO15228 680 aa11.23□□□□□ -0.61
MS4A4A-205ENST00000529991 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
MS4A4A-205ENST00000529991 C6orf132Q5T0Z8 1188 aa11.22□□□□□ -0.61
MS4A4A-205ENST00000529991 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
MS4A4A-205ENST00000529991 HIC1Q14526 733 aa11.21□□□□□ -0.61
MS4A4A-205ENST00000529991 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
MS4A4A-205ENST00000529991 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
MS4A4A-205ENST00000529991 AK7Q96M32 723 aa11.2□□□□□ -0.62
MS4A4A-205ENST00000529991 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
MS4A4A-205ENST00000529991 ST18O60284 1047 aa11.18□□□□□ -0.62
MS4A4A-205ENST00000529991 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
MS4A4A-205ENST00000529991 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
MS4A4A-205ENST00000529991 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
MS4A4A-205ENST00000529991 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
MS4A4A-205ENST00000529991 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
MS4A4A-205ENST00000529991 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
MS4A4A-205ENST00000529991 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
MS4A4A-205ENST00000529991 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
MS4A4A-205ENST00000529991 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
MS4A4A-205ENST00000529991 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
MS4A4A-205ENST00000529991 IRF6O14896 467 aa11.15□□□□□ -0.62
MS4A4A-205ENST00000529991 TRIM66O15016 1216 aa11.15□□□□□ -0.62
MS4A4A-205ENST00000529991 FAM161AQ3B820 660 aa11.15□□□□□ -0.62
MS4A4A-205ENST00000529991 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
MS4A4A-205ENST00000529991 COL9A1P20849 921 aa11.14□□□□□ -0.63
MS4A4A-205ENST00000529991 ERBB3P21860 1342 aa11.13□□□□□ -0.63
MS4A4A-205ENST00000529991 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
MS4A4A-205ENST00000529991 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
MS4A4A-205ENST00000529991 PADI6Q6TGC4 694 aa11.13□□□□□ -0.63
MS4A4A-205ENST00000529991 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
MS4A4A-205ENST00000529991 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
MS4A4A-205ENST00000529991 EMP3P54852 163 aa11.12□□□□□ -0.63
MS4A4A-205ENST00000529991 BCL2L12Q9HB09 334 aa11.12□□□□□ -0.63
MS4A4A-205ENST00000529991 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
MS4A4A-205ENST00000529991 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
MS4A4A-205ENST00000529991 PTPREP23469 700 aa11.1□□□□□ -0.63
MS4A4A-205ENST00000529991 PDE4DQ08499 809 aa11.1□□□□□ -0.63
MS4A4A-205ENST00000529991 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
MS4A4A-205ENST00000529991 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
MS4A4A-205ENST00000529991 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms