RNA–Protein interactions for RNA: ENST00000529991.1

MS4A4A-205, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-205ENST00000529991 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
MS4A4A-205ENST00000529991 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
MS4A4A-205ENST00000529991 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
MS4A4A-205ENST00000529991 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
MS4A4A-205ENST00000529991 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
MS4A4A-205ENST00000529991 FOXD1Q16676 465 aa19.39■□□□□ 0.69
MS4A4A-205ENST00000529991 ADRA2BP18089 450 aa18.95■□□□□ 0.62
MS4A4A-205ENST00000529991 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
MS4A4A-205ENST00000529991 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
MS4A4A-205ENST00000529991 MSH5O43196 834 aa17.67■□□□□ 0.42
MS4A4A-205ENST00000529991 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
MS4A4A-205ENST00000529991 KCNA4P22459 653 aa17.59■□□□□ 0.41
MS4A4A-205ENST00000529991 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
MS4A4A-205ENST00000529991 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
MS4A4A-205ENST00000529991 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
MS4A4A-205ENST00000529991 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
MS4A4A-205ENST00000529991 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
MS4A4A-205ENST00000529991 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
MS4A4A-205ENST00000529991 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
MS4A4A-205ENST00000529991 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
MS4A4A-205ENST00000529991 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
MS4A4A-205ENST00000529991 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
MS4A4A-205ENST00000529991 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
MS4A4A-205ENST00000529991 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
MS4A4A-205ENST00000529991 ZBTB22O15209 634 aa16.22■□□□□ 0.19
MS4A4A-205ENST00000529991 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
MS4A4A-205ENST00000529991 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
MS4A4A-205ENST00000529991 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
MS4A4A-205ENST00000529991 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
MS4A4A-205ENST00000529991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
MS4A4A-205ENST00000529991 NISCHQ9Y2I1 1504 aa15.75■□□□□ 0.11
MS4A4A-205ENST00000529991 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
MS4A4A-205ENST00000529991 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
MS4A4A-205ENST00000529991 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
MS4A4A-205ENST00000529991 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
MS4A4A-205ENST00000529991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
MS4A4A-205ENST00000529991 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
MS4A4A-205ENST00000529991 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
MS4A4A-205ENST00000529991 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
MS4A4A-205ENST00000529991 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
MS4A4A-205ENST00000529991 APLP2Q06481 763 aa15.06■□□□□ 0
MS4A4A-205ENST00000529991 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
MS4A4A-205ENST00000529991 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
MS4A4A-205ENST00000529991 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
MS4A4A-205ENST00000529991 CAPN15O75808 1086 aa14.97□□□□□ -0.01
MS4A4A-205ENST00000529991 POLA2Q14181 598 aa14.78□□□□□ -0.04
MS4A4A-205ENST00000529991 ABCB7O75027 752 aa14.77□□□□□ -0.05
MS4A4A-205ENST00000529991 FKBP8Q14318 412 aa14.77□□□□□ -0.05
MS4A4A-205ENST00000529991 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
MS4A4A-205ENST00000529991 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
MS4A4A-205ENST00000529991 DSG3P32926 999 aa14.59□□□□□ -0.07
MS4A4A-205ENST00000529991 FBLN2P98095 1184 aa14.56□□□□□ -0.08
MS4A4A-205ENST00000529991 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
MS4A4A-205ENST00000529991 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
MS4A4A-205ENST00000529991 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
MS4A4A-205ENST00000529991 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
MS4A4A-205ENST00000529991 PROM2Q8N271 834 aa14.14□□□□□ -0.15
MS4A4A-205ENST00000529991 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
MS4A4A-205ENST00000529991 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
MS4A4A-205ENST00000529991 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
MS4A4A-205ENST00000529991 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
MS4A4A-205ENST00000529991 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
MS4A4A-205ENST00000529991 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
MS4A4A-205ENST00000529991 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
MS4A4A-205ENST00000529991 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
MS4A4A-205ENST00000529991 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
MS4A4A-205ENST00000529991 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
MS4A4A-205ENST00000529991 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
MS4A4A-205ENST00000529991 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
MS4A4A-205ENST00000529991 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
MS4A4A-205ENST00000529991 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
MS4A4A-205ENST00000529991 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
MS4A4A-205ENST00000529991 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
MS4A4A-205ENST00000529991 MIER1Q8N108 512 aa13.67□□□□□ -0.22
MS4A4A-205ENST00000529991 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
MS4A4A-205ENST00000529991 ABCC9O60706 1549 aa13.66□□□□□ -0.22
MS4A4A-205ENST00000529991 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
MS4A4A-205ENST00000529991 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
MS4A4A-205ENST00000529991 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
MS4A4A-205ENST00000529991 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
MS4A4A-205ENST00000529991 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
MS4A4A-205ENST00000529991 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
MS4A4A-205ENST00000529991 PKD2Q13563 968 aa13.42□□□□□ -0.26
MS4A4A-205ENST00000529991 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
MS4A4A-205ENST00000529991 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
MS4A4A-205ENST00000529991 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
MS4A4A-205ENST00000529991 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
MS4A4A-205ENST00000529991 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
MS4A4A-205ENST00000529991 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
MS4A4A-205ENST00000529991 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
MS4A4A-205ENST00000529991 NUBP1P53384 320 aa13.25□□□□□ -0.29
MS4A4A-205ENST00000529991 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
MS4A4A-205ENST00000529991 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
MS4A4A-205ENST00000529991 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
MS4A4A-205ENST00000529991 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
MS4A4A-205ENST00000529991 RGL2O15211 777 aa13.18□□□□□ -0.3
MS4A4A-205ENST00000529991 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
MS4A4A-205ENST00000529991 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
MS4A4A-205ENST00000529991 GSE1Q14687 1217 aa13.14□□□□□ -0.31
MS4A4A-205ENST00000529991 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms