RNA–Protein interactions for RNA: ENST00000525535.2

PAX6-220, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-220ENST00000525535 CAMK2BQ13554 666 aa11.21□□□□□ -0.61
PAX6-220ENST00000525535 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
PAX6-220ENST00000525535 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
PAX6-220ENST00000525535 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
PAX6-220ENST00000525535 SNPHO15079 494 aa11.17□□□□□ -0.62
PAX6-220ENST00000525535 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
PAX6-220ENST00000525535 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
PAX6-220ENST00000525535 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
PAX6-220ENST00000525535 SLC34A2O95436 690 aa11.14□□□□□ -0.63
PAX6-220ENST00000525535 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
PAX6-220ENST00000525535 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
PAX6-220ENST00000525535 CCDC88BA6NC98 1476 aa11.13□□□□□ -0.63
PAX6-220ENST00000525535 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
PAX6-220ENST00000525535 CFTRP13569 1480 aa11.12□□□□□ -0.63
PAX6-220ENST00000525535 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
PAX6-220ENST00000525535 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
PAX6-220ENST00000525535 HSPA2P54652 639 aa11.11□□□□□ -0.63
PAX6-220ENST00000525535 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
PAX6-220ENST00000525535 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
PAX6-220ENST00000525535 TBC1D12O60347 775 aa11.1□□□□□ -0.63
PAX6-220ENST00000525535 COL17A1Q9UMD9 1497 aaPredicted RBP11.09□□□□□ -0.63
PAX6-220ENST00000525535 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
PAX6-220ENST00000525535 DPYSL4O14531 572 aa11.08□□□□□ -0.64
PAX6-220ENST00000525535 SEMA3EO15041 775 aa11.07□□□□□ -0.64
PAX6-220ENST00000525535 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
PAX6-220ENST00000525535 PTPRMP28827 1452 aa11.06□□□□□ -0.64
PAX6-220ENST00000525535 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
PAX6-220ENST00000525535 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
PAX6-220ENST00000525535 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
PAX6-220ENST00000525535 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.64
PAX6-220ENST00000525535 CEP170Q5SW79 1584 aa11.04□□□□□ -0.64
PAX6-220ENST00000525535 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
PAX6-220ENST00000525535 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
PAX6-220ENST00000525535 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
PAX6-220ENST00000525535 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
PAX6-220ENST00000525535 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
PAX6-220ENST00000525535 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
PAX6-220ENST00000525535 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
PAX6-220ENST00000525535 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
PAX6-220ENST00000525535 PDIA6Q15084 440 aa11.01□□□□□ -0.65
PAX6-220ENST00000525535 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
PAX6-220ENST00000525535 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
PAX6-220ENST00000525535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
PAX6-220ENST00000525535 PCDHGA4Q9Y5G9 962 aa10.99□□□□□ -0.65
PAX6-220ENST00000525535 KIF21BO75037 1637 aa10.98□□□□□ -0.65
PAX6-220ENST00000525535 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
PAX6-220ENST00000525535 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
PAX6-220ENST00000525535 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
PAX6-220ENST00000525535 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
PAX6-220ENST00000525535 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
PAX6-220ENST00000525535 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
PAX6-220ENST00000525535 EVI5O60447 810 aa10.93□□□□□ -0.66
PAX6-220ENST00000525535 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
PAX6-220ENST00000525535 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
PAX6-220ENST00000525535 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
PAX6-220ENST00000525535 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
PAX6-220ENST00000525535 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
PAX6-220ENST00000525535 ABCC8Q09428 1581 aa10.91□□□□□ -0.66
PAX6-220ENST00000525535 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
PAX6-220ENST00000525535 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
PAX6-220ENST00000525535 PSDA5PKW4 1024 aaPredicted RBP10.9□□□□□ -0.66
PAX6-220ENST00000525535 PTGER2P43116 358 aa10.9□□□□□ -0.66
PAX6-220ENST00000525535 SHROOM2Q13796 1616 aa10.9□□□□□ -0.66
PAX6-220ENST00000525535 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
PAX6-220ENST00000525535 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
PAX6-220ENST00000525535 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
PAX6-220ENST00000525535 ST18O60284 1047 aa10.86□□□□□ -0.67
PAX6-220ENST00000525535 NUDT7P0C024 238 aa10.86□□□□□ -0.67
PAX6-220ENST00000525535 DDX12PQ92771 950 aa10.86□□□□□ -0.67
PAX6-220ENST00000525535 UBAP1LF5GYI3 381 aa10.85□□□□□ -0.67
PAX6-220ENST00000525535 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
PAX6-220ENST00000525535 FAM163AQ96GL9 167 aaPredicted RBP10.85□□□□□ -0.67
PAX6-220ENST00000525535 MADDQ8WXG6 1647 aa10.84□□□□□ -0.67
PAX6-220ENST00000525535 IQSEC2Q5JU85 1478 aa10.83□□□□□ -0.68
PAX6-220ENST00000525535 PHF14O94880 888 aa10.83□□□□□ -0.68
PAX6-220ENST00000525535 KHSRPQ92945 711 aaKnown RBP eCLIP10.83□□□□□ -0.68
PAX6-220ENST00000525535 HSPA1LP34931 641 aa10.82□□□□□ -0.68
PAX6-220ENST00000525535 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
PAX6-220ENST00000525535 EPAS1Q99814 870 aa10.82□□□□□ -0.68
PAX6-220ENST00000525535 WDR97A6NE52 1622 aa10.82□□□□□ -0.68
PAX6-220ENST00000525535 SOGA1O94964 1423 aa10.82□□□□□ -0.68
PAX6-220ENST00000525535 OSBPP22059 807 aa10.81□□□□□ -0.68
PAX6-220ENST00000525535 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
PAX6-220ENST00000525535 GLI2P10070 1586 aa10.81□□□□□ -0.68
PAX6-220ENST00000525535 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
PAX6-220ENST00000525535 EMP3P54852 163 aa10.8□□□□□ -0.68
PAX6-220ENST00000525535 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
PAX6-220ENST00000525535 FBXW7Q969H0 707 aa10.8□□□□□ -0.68
PAX6-220ENST00000525535 STRCQ7RTU9 1775 aa10.8□□□□□ -0.68
PAX6-220ENST00000525535 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
PAX6-220ENST00000525535 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
PAX6-220ENST00000525535 FOSBP53539 338 aa10.78□□□□□ -0.68
PAX6-220ENST00000525535 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
PAX6-220ENST00000525535 TYW1BQ6NUM6 668 aa10.78□□□□□ -0.68
PAX6-220ENST00000525535 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
PAX6-220ENST00000525535 LHX6Q9UPM6 363 aa10.78□□□□□ -0.68
PAX6-220ENST00000525535 RIMS1Q86UR5 1692 aaKnown RBP10.77□□□□□ -0.69
PAX6-220ENST00000525535 TEX14Q8IWB6 1497 aa10.77□□□□□ -0.69
PAX6-220ENST00000525535 PRIM1P49642 420 aaKnown RBP10.77□□□□□ -0.69
PAX6-220ENST00000525535 ERBB3P21860 1342 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms