RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
HMBOX1-211ENST00000524238 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
HMBOX1-211ENST00000524238 EIF3AQ14152 1382 aaKnown RBP9.81□□□□□ -0.84
HMBOX1-211ENST00000524238 ANKRD30AQ9BXX3 1397 aa9.81□□□□□ -0.84
HMBOX1-211ENST00000524238 EIF5BO60841 1220 aaKnown RBP9.81□□□□□ -0.84
HMBOX1-211ENST00000524238 KDM5DQ9BY66 1539 aa9.81□□□□□ -0.84
HMBOX1-211ENST00000524238 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
HMBOX1-211ENST00000524238 VIRMAQ69YN4 1812 aaKnown RBP9.8□□□□□ -0.84
HMBOX1-211ENST00000524238 LAMC1P11047 1609 aa9.8□□□□□ -0.84
HMBOX1-211ENST00000524238 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
HMBOX1-211ENST00000524238 URB2Q14146 1524 aaKnown RBP9.79□□□□□ -0.84
HMBOX1-211ENST00000524238 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
HMBOX1-211ENST00000524238 BECN1Q14457 450 aa9.79□□□□□ -0.84
HMBOX1-211ENST00000524238 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
HMBOX1-211ENST00000524238 PBRM1Q86U86 1689 aa9.78□□□□□ -0.84
HMBOX1-211ENST00000524238 SHANK2Q9UPX8 1470 aa9.78□□□□□ -0.84
HMBOX1-211ENST00000524238 PKD2Q13563 968 aa9.78□□□□□ -0.84
HMBOX1-211ENST00000524238 ADCY10Q96PN6 1610 aa9.78□□□□□ -0.84
HMBOX1-211ENST00000524238 CEP170Q5SW79 1584 aa9.78□□□□□ -0.84
HMBOX1-211ENST00000524238 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.84
HMBOX1-211ENST00000524238 RAPGEF6Q8TEU7 1601 aa9.77□□□□□ -0.85
HMBOX1-211ENST00000524238 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
HMBOX1-211ENST00000524238 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
HMBOX1-211ENST00000524238 ANKRD50Q9ULJ7 1429 aa9.76□□□□□ -0.85
HMBOX1-211ENST00000524238 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
HMBOX1-211ENST00000524238 TROQ12816 1431 aaPredicted RBP9.75□□□□□ -0.85
HMBOX1-211ENST00000524238 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
HMBOX1-211ENST00000524238 C8orf34Q49A92 452 aa9.75□□□□□ -0.85
HMBOX1-211ENST00000524238 TRPM1Q7Z4N2 1603 aa9.75□□□□□ -0.85
HMBOX1-211ENST00000524238 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
HMBOX1-211ENST00000524238 TARBP1Q13395 1621 aaKnown RBP9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 PDS5BQ9NTI5 1447 aa9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 ZMYM3Q14202 1370 aa9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 COL17A1Q9UMD9 1497 aaPredicted RBP9.74□□□□□ -0.85
HMBOX1-211ENST00000524238 CCDC144AA2RUR9 1427 aa9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 NGEFQ8N5V2 710 aa9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 GPRASP1Q5JY77 1395 aa9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 MAPK8IP3Q9UPT6 1336 aa9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 EIF4G3O43432 1585 aaKnown RBP9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 CDCA7LQ96GN5 454 aa9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 ZNF608Q9ULD9 1512 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-211ENST00000524238 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
HMBOX1-211ENST00000524238 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
HMBOX1-211ENST00000524238 AAMPQ13685 434 aa9.72□□□□□ -0.85
HMBOX1-211ENST00000524238 NUP155O75694 1391 aa9.72□□□□□ -0.85
HMBOX1-211ENST00000524238 PTPRGP23470 1445 aa9.71□□□□□ -0.85
HMBOX1-211ENST00000524238 PLIN1O60240 522 aa9.71□□□□□ -0.85
HMBOX1-211ENST00000524238 GPATCH8Q9UKJ3 1502 aaKnown RBP9.71□□□□□ -0.86
HMBOX1-211ENST00000524238 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 PRDM15P57071 1507 aaPredicted RBP9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 NUP160Q12769 1436 aa9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 WDR43Q15061 677 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 ISY1Q9ULR0 285 aaKnown RBP9.7□□□□□ -0.86
HMBOX1-211ENST00000524238 ZNF644Q9H582 1327 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-211ENST00000524238 TMF1P82094 1093 aa9.69□□□□□ -0.86
HMBOX1-211ENST00000524238 DCAF11Q8TEB1 546 aa9.69□□□□□ -0.86
HMBOX1-211ENST00000524238 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
HMBOX1-211ENST00000524238 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
HMBOX1-211ENST00000524238 ARHGEF5Q12774 1597 aa9.68□□□□□ -0.86
HMBOX1-211ENST00000524238 C9orf84Q5VXU9 1444 aa9.68□□□□□ -0.86
HMBOX1-211ENST00000524238 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 CLCN1P35523 988 aa9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 ZNF521Q96K83 1311 aa9.67□□□□□ -0.86
HMBOX1-211ENST00000524238 DISP1Q96F81 1524 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 CDC42BPAQ5VT25 1732 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 GOLGA6L3A6NEY3 463 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 PIK3C2GO75747 1445 aa9.66□□□□□ -0.86
HMBOX1-211ENST00000524238 RGS3P49796 1198 aa9.65□□□□□ -0.86
HMBOX1-211ENST00000524238 C20orf194Q5TEA3 1177 aa9.65□□□□□ -0.86
HMBOX1-211ENST00000524238 PLXNC1O60486 1568 aa9.65□□□□□ -0.86
HMBOX1-211ENST00000524238 CCDC141Q6ZP82 1450 aa9.65□□□□□ -0.87
HMBOX1-211ENST00000524238 SLFN5Q08AF3 891 aa9.65□□□□□ -0.87
HMBOX1-211ENST00000524238 CC2D1BQ5T0F9 858 aaKnown RBP9.65□□□□□ -0.87
HMBOX1-211ENST00000524238 RSPH4AQ5TD94 716 aa9.65□□□□□ -0.87
HMBOX1-211ENST00000524238 PKNOX2Q96KN3 472 aa9.65□□□□□ -0.87
HMBOX1-211ENST00000524238 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 ABCC10Q5T3U5 1492 aa9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 E9PSI1 815 aa9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 HSP90AA1P07900 732 aaKnown RBP9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 TRMT2AQ8IZ69 625 aaKnown RBP9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms