RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
CSMD1-211ENST00000523062 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
CSMD1-211ENST00000523062 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
CSMD1-211ENST00000523062 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
CSMD1-211ENST00000523062 RGS20O76081 388 aa10.68□□□□□ -0.7
CSMD1-211ENST00000523062 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
CSMD1-211ENST00000523062 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-211ENST00000523062 TK2O00142 265 aa10.67□□□□□ -0.7
CSMD1-211ENST00000523062 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
CSMD1-211ENST00000523062 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
CSMD1-211ENST00000523062 IFT140Q96RY7 1462 aa10.66□□□□□ -0.7
CSMD1-211ENST00000523062 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
CSMD1-211ENST00000523062 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
CSMD1-211ENST00000523062 THOC2Q8NI27 1593 aaKnown RBP10.64□□□□□ -0.71
CSMD1-211ENST00000523062 HRO43593 1189 aa10.62□□□□□ -0.71
CSMD1-211ENST00000523062 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-211ENST00000523062 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
CSMD1-211ENST00000523062 IRX2Q9BZI1 471 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-211ENST00000523062 ARHGAP35Q9NRY4 1499 aa10.61□□□□□ -0.71
CSMD1-211ENST00000523062 KCTD12Q96CX2 325 aaKnown RBP10.6□□□□□ -0.71
CSMD1-211ENST00000523062 GRIN2BQ13224 1484 aa10.6□□□□□ -0.71
CSMD1-211ENST00000523062 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
CSMD1-211ENST00000523062 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
CSMD1-211ENST00000523062 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
CSMD1-211ENST00000523062 CTTNBP2Q8WZ74 1663 aa10.58□□□□□ -0.72
CSMD1-211ENST00000523062 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
CSMD1-211ENST00000523062 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
CSMD1-211ENST00000523062 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSMD1-211ENST00000523062 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
CSMD1-211ENST00000523062 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
CSMD1-211ENST00000523062 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
CSMD1-211ENST00000523062 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-211ENST00000523062 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
CSMD1-211ENST00000523062 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
CSMD1-211ENST00000523062 EIF4G3O43432 1585 aaKnown RBP10.54□□□□□ -0.72
CSMD1-211ENST00000523062 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
CSMD1-211ENST00000523062 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
CSMD1-211ENST00000523062 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
CSMD1-211ENST00000523062 HRCP23327 699 aa10.53□□□□□ -0.72
CSMD1-211ENST00000523062 PSEN2P49810 448 aa10.52□□□□□ -0.73
CSMD1-211ENST00000523062 SNAPC4Q5SXM2 1469 aa10.51□□□□□ -0.73
CSMD1-211ENST00000523062 MAGI1Q96QZ7 1491 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-211ENST00000523062 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
CSMD1-211ENST00000523062 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-211ENST00000523062 MAP3K1Q13233 1512 aa10.49□□□□□ -0.73
CSMD1-211ENST00000523062 SAMD9Q5K651 1589 aa10.49□□□□□ -0.73
CSMD1-211ENST00000523062 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
CSMD1-211ENST00000523062 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
CSMD1-211ENST00000523062 FHOD3Q2V2M9 1422 aa10.48□□□□□ -0.73
CSMD1-211ENST00000523062 PTPN5P54829 565 aa10.47□□□□□ -0.73
CSMD1-211ENST00000523062 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
CSMD1-211ENST00000523062 FYCO1Q9BQS8 1478 aa10.47□□□□□ -0.73
CSMD1-211ENST00000523062 PCF11O94913 1555 aaKnown RBP10.47□□□□□ -0.73
CSMD1-211ENST00000523062 IQGAP2Q13576 1575 aa10.47□□□□□ -0.73
CSMD1-211ENST00000523062 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
CSMD1-211ENST00000523062 GRIN2AQ12879 1464 aa10.46□□□□□ -0.74
CSMD1-211ENST00000523062 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
CSMD1-211ENST00000523062 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
CSMD1-211ENST00000523062 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
CSMD1-211ENST00000523062 A0A0G2JS52 829 aa10.45□□□□□ -0.74
CSMD1-211ENST00000523062 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
CSMD1-211ENST00000523062 KIAA0586Q9BVV6 1533 aa10.43□□□□□ -0.74
CSMD1-211ENST00000523062 P3H3Q8IVL6 736 aa10.43□□□□□ -0.74
CSMD1-211ENST00000523062 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
CSMD1-211ENST00000523062 STK25O00506 426 aa10.41□□□□□ -0.74
CSMD1-211ENST00000523062 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-211ENST00000523062 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
CSMD1-211ENST00000523062 LRRC9Q6ZRR7 1453 aa10.39□□□□□ -0.75
CSMD1-211ENST00000523062 TBC1D12O60347 775 aa10.39□□□□□ -0.75
CSMD1-211ENST00000523062 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-211ENST00000523062 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-211ENST00000523062 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
CSMD1-211ENST00000523062 NUP160Q12769 1436 aa10.39□□□□□ -0.75
CSMD1-211ENST00000523062 PPP1R37O75864 691 aa10.38□□□□□ -0.75
CSMD1-211ENST00000523062 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
CSMD1-211ENST00000523062 THSD4Q6ZMP0 1018 aa10.37□□□□□ -0.75
CSMD1-211ENST00000523062 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
CSMD1-211ENST00000523062 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
CSMD1-211ENST00000523062 KIAA0556O60303 1618 aa10.36□□□□□ -0.75
CSMD1-211ENST00000523062 ATP1B4Q9UN42 357 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-211ENST00000523062 HECW1Q76N89 1606 aa10.35□□□□□ -0.75
CSMD1-211ENST00000523062 CCDC18Q5T9S5 1454 aa10.35□□□□□ -0.75
CSMD1-211ENST00000523062 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
CSMD1-211ENST00000523062 GOLGA8CPA6NN73 597 aa10.34□□□□□ -0.75
CSMD1-211ENST00000523062 FOXK1P85037 733 aa10.34□□□□□ -0.75
CSMD1-211ENST00000523062 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
CSMD1-211ENST00000523062 Q6ZNB5 142 aa10.33□□□□□ -0.76
CSMD1-211ENST00000523062 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
CSMD1-211ENST00000523062 EHBP1L1Q8N3D4 1523 aa10.32□□□□□ -0.76
CSMD1-211ENST00000523062 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
CSMD1-211ENST00000523062 CARMIL2Q6F5E8 1435 aa10.31□□□□□ -0.76
CSMD1-211ENST00000523062 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-211ENST00000523062 WNT2BQ93097 391 aa10.3□□□□□ -0.76
CSMD1-211ENST00000523062 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
CSMD1-211ENST00000523062 CCER1Q8TC90 406 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-211ENST00000523062 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
CSMD1-211ENST00000523062 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
CSMD1-211ENST00000523062 CHD1O14646 1710 aa10.27□□□□□ -0.76
CSMD1-211ENST00000523062 RAPGEF6Q8TEU7 1601 aa10.27□□□□□ -0.77
CSMD1-211ENST00000523062 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms