RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.72
HMGB4-204ENST00000522796 MPNDQ8N594 471 aa10.52□□□□□ -0.72
HMGB4-204ENST00000522796 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
HMGB4-204ENST00000522796 ZBTB22O15209 634 aa10.52□□□□□ -0.73
HMGB4-204ENST00000522796 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
HMGB4-204ENST00000522796 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
HMGB4-204ENST00000522796 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 MRE11P49959 708 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 RNF123Q5XPI4 1314 aa10.51□□□□□ -0.73
HMGB4-204ENST00000522796 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
HMGB4-204ENST00000522796 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
HMGB4-204ENST00000522796 PANK2Q9BZ23 570 aa10.5□□□□□ -0.73
HMGB4-204ENST00000522796 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
HMGB4-204ENST00000522796 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
HMGB4-204ENST00000522796 KDM4AO75164 1064 aa10.48□□□□□ -0.73
HMGB4-204ENST00000522796 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
HMGB4-204ENST00000522796 SIN3AQ96ST3 1273 aa10.48□□□□□ -0.73
HMGB4-204ENST00000522796 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
HMGB4-204ENST00000522796 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGB4-204ENST00000522796 CHMP4CQ96CF2 233 aa10.46□□□□□ -0.73
HMGB4-204ENST00000522796 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
HMGB4-204ENST00000522796 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
HMGB4-204ENST00000522796 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
HMGB4-204ENST00000522796 NBPF9Q3BBW0 867 aa10.45□□□□□ -0.74
HMGB4-204ENST00000522796 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
HMGB4-204ENST00000522796 UQCRHLA0A096LP55 91 aa10.44□□□□□ -0.74
HMGB4-204ENST00000522796 UQCRHP07919 91 aa10.44□□□□□ -0.74
HMGB4-204ENST00000522796 ZNF500O60304 480 aaPredicted RBP10.44□□□□□ -0.74
HMGB4-204ENST00000522796 TSPYL1Q9H0U9 437 aa10.44□□□□□ -0.74
HMGB4-204ENST00000522796 SMG6Q86US8 1419 aaKnown RBP10.43□□□□□ -0.74
HMGB4-204ENST00000522796 OTUD6BQ8N6M0 293 aa10.43□□□□□ -0.74
HMGB4-204ENST00000522796 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
HMGB4-204ENST00000522796 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
HMGB4-204ENST00000522796 CASC1Q6TDU7 716 aa10.42□□□□□ -0.74
HMGB4-204ENST00000522796 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
HMGB4-204ENST00000522796 KCNJ4P48050 445 aa10.41□□□□□ -0.74
HMGB4-204ENST00000522796 MAP2K1Q02750 393 aaPredicted RBP10.41□□□□□ -0.74
HMGB4-204ENST00000522796 EFCC1Q9HA90 598 aa10.41□□□□□ -0.74
HMGB4-204ENST00000522796 GOLIM4O00461 696 aa10.41□□□□□ -0.74
HMGB4-204ENST00000522796 EP400NLQ6ZTU2 488 aa10.41□□□□□ -0.74
HMGB4-204ENST00000522796 R3HCC1Q9Y3T6 440 aaKnown RBP10.41□□□□□ -0.74
HMGB4-204ENST00000522796 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.74
HMGB4-204ENST00000522796 GRPEL1Q9HAV7 217 aa10.4□□□□□ -0.74
HMGB4-204ENST00000522796 SATB1Q01826 763 aa10.39□□□□□ -0.75
HMGB4-204ENST00000522796 TULP2O00295 520 aa10.39□□□□□ -0.75
HMGB4-204ENST00000522796 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
HMGB4-204ENST00000522796 TERF2IPQ9NYB0 399 aa10.39□□□□□ -0.75
HMGB4-204ENST00000522796 CCDC66A2RUB6 948 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
HMGB4-204ENST00000522796 CCDC96Q2M329 555 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 RINLQ6ZS11 566 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 RAI14Q9P0K7 980 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 TSHZ1Q6ZSZ6 1077 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 EXOC8Q8IYI6 725 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
HMGB4-204ENST00000522796 AKNAQ7Z591 1439 aa10.37□□□□□ -0.75
HMGB4-204ENST00000522796 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
HMGB4-204ENST00000522796 CBX1P83916 185 aa10.37□□□□□ -0.75
HMGB4-204ENST00000522796 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
HMGB4-204ENST00000522796 RNF217Q8TC41 542 aa10.37□□□□□ -0.75
HMGB4-204ENST00000522796 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
HMGB4-204ENST00000522796 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
HMGB4-204ENST00000522796 STK26Q9P289 416 aa10.37□□□□□ -0.75
HMGB4-204ENST00000522796 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
HMGB4-204ENST00000522796 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
HMGB4-204ENST00000522796 TIGD1Q96MW7 591 aa10.36□□□□□ -0.75
HMGB4-204ENST00000522796 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
HMGB4-204ENST00000522796 LOC102724159A0A0B4J2E5 919 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 PWP2Q15269 919 aaKnown RBP10.35□□□□□ -0.75
HMGB4-204ENST00000522796 NBPF6Q5VWK0 638 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 NBPF5PQ86XG9 351 aaPredicted RBP10.35□□□□□ -0.75
HMGB4-204ENST00000522796 NBPF4Q96M43 638 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 RBM25P49756 843 aaKnown RBP10.35□□□□□ -0.75
HMGB4-204ENST00000522796 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
HMGB4-204ENST00000522796 WDR97A6NE52 1622 aa10.34□□□□□ -0.75
HMGB4-204ENST00000522796 CCDC173Q0VFZ6 552 aa10.34□□□□□ -0.75
HMGB4-204ENST00000522796 BECN1Q14457 450 aa10.34□□□□□ -0.75
HMGB4-204ENST00000522796 ZNF771Q7L3S4 317 aaPredicted RBP10.34□□□□□ -0.75
HMGB4-204ENST00000522796 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
HMGB4-204ENST00000522796 RAD21O60216 631 aa10.34□□□□□ -0.75
HMGB4-204ENST00000522796 SSR1P43307 286 aaKnown RBP10.34□□□□□ -0.75
HMGB4-204ENST00000522796 ZBTB12Q9Y330 459 aaPredicted RBP10.34□□□□□ -0.75
HMGB4-204ENST00000522796 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
HMGB4-204ENST00000522796 ZBTB9Q96C00 473 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 MYCBPQ99417 103 aaPredicted RBP10.33□□□□□ -0.76
HMGB4-204ENST00000522796 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 CUX2O14529 1486 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 ARMCX6Q7L4S7 300 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
HMGB4-204ENST00000522796 CAPN2P17655 700 aa10.32□□□□□ -0.76
HMGB4-204ENST00000522796 HS1BP3Q53T59 392 aa10.32□□□□□ -0.76
HMGB4-204ENST00000522796 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms