RNA–Protein interactions for RNA: ENST00000521529.5

H2AFV-208, Transcript of H2A histone family member V, humanhuman

TSL 5 BASIC

Gene H2AFV, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-208ENST00000521529 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■■■ 32.8
H2AFV-208ENST00000521529 TBC1D12O60347 775 aa11.34□□□□□ -0.59
H2AFV-208ENST00000521529 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
H2AFV-208ENST00000521529 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
H2AFV-208ENST00000521529 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
H2AFV-208ENST00000521529 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
H2AFV-208ENST00000521529 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
H2AFV-208ENST00000521529 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
H2AFV-208ENST00000521529 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
H2AFV-208ENST00000521529 PBX2P40425 430 aa11.28□□□□□ -0.6
H2AFV-208ENST00000521529 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
H2AFV-208ENST00000521529 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
H2AFV-208ENST00000521529 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
H2AFV-208ENST00000521529 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
H2AFV-208ENST00000521529 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
H2AFV-208ENST00000521529 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
H2AFV-208ENST00000521529 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
H2AFV-208ENST00000521529 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
H2AFV-208ENST00000521529 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
H2AFV-208ENST00000521529 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
H2AFV-208ENST00000521529 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
H2AFV-208ENST00000521529 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
H2AFV-208ENST00000521529 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
H2AFV-208ENST00000521529 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
H2AFV-208ENST00000521529 ARHGAP33O14559 1287 aa11.21□□□□□ -0.61
H2AFV-208ENST00000521529 EVI5O60447 810 aa11.21□□□□□ -0.61
H2AFV-208ENST00000521529 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
H2AFV-208ENST00000521529 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
H2AFV-208ENST00000521529 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
H2AFV-208ENST00000521529 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
H2AFV-208ENST00000521529 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
H2AFV-208ENST00000521529 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
H2AFV-208ENST00000521529 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
H2AFV-208ENST00000521529 FOSBP53539 338 aa11.18□□□□□ -0.62
H2AFV-208ENST00000521529 SYNJ1O43426 1573 aa11.18□□□□□ -0.62
H2AFV-208ENST00000521529 PTGER2P43116 358 aa11.17□□□□□ -0.62
H2AFV-208ENST00000521529 PSEN2P49810 448 aa11.17□□□□□ -0.62
H2AFV-208ENST00000521529 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
H2AFV-208ENST00000521529 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
H2AFV-208ENST00000521529 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
H2AFV-208ENST00000521529 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
H2AFV-208ENST00000521529 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
H2AFV-208ENST00000521529 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
H2AFV-208ENST00000521529 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
H2AFV-208ENST00000521529 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
H2AFV-208ENST00000521529 ADGRD1Q6QNK2 874 aa11.13□□□□□ -0.63
H2AFV-208ENST00000521529 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
H2AFV-208ENST00000521529 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
H2AFV-208ENST00000521529 SOGA1O94964 1423 aa11.11□□□□□ -0.63
H2AFV-208ENST00000521529 TK2O00142 265 aa11.11□□□□□ -0.63
H2AFV-208ENST00000521529 DPYSL4O14531 572 aa11.11□□□□□ -0.63
H2AFV-208ENST00000521529 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
H2AFV-208ENST00000521529 MAGI1Q96QZ7 1491 aaPredicted RBP11.09□□□□□ -0.63
H2AFV-208ENST00000521529 HRO43593 1189 aa11.08□□□□□ -0.64
H2AFV-208ENST00000521529 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
H2AFV-208ENST00000521529 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
H2AFV-208ENST00000521529 PCDHGA10Q9Y5H3 936 aa11.08□□□□□ -0.64
H2AFV-208ENST00000521529 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
H2AFV-208ENST00000521529 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
H2AFV-208ENST00000521529 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
H2AFV-208ENST00000521529 PTPREP23469 700 aa11.05□□□□□ -0.64
H2AFV-208ENST00000521529 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
H2AFV-208ENST00000521529 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
H2AFV-208ENST00000521529 PHF14O94880 888 aa11.04□□□□□ -0.64
H2AFV-208ENST00000521529 E2F4Q16254 413 aa11.04□□□□□ -0.64
H2AFV-208ENST00000521529 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
H2AFV-208ENST00000521529 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
H2AFV-208ENST00000521529 PDIA6Q15084 440 aa11.02□□□□□ -0.65
H2AFV-208ENST00000521529 FGD5Q6ZNL6 1462 aa11.01□□□□□ -0.65
H2AFV-208ENST00000521529 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
H2AFV-208ENST00000521529 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
H2AFV-208ENST00000521529 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
H2AFV-208ENST00000521529 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
H2AFV-208ENST00000521529 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
H2AFV-208ENST00000521529 WDR97A6NE52 1622 aa11□□□□□ -0.65
H2AFV-208ENST00000521529 FBXW7Q969H0 707 aa11□□□□□ -0.65
H2AFV-208ENST00000521529 WDR70Q9NW82 654 aa11□□□□□ -0.65
H2AFV-208ENST00000521529 EPAS1Q99814 870 aa10.97□□□□□ -0.65
H2AFV-208ENST00000521529 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
H2AFV-208ENST00000521529 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
H2AFV-208ENST00000521529 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
H2AFV-208ENST00000521529 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
H2AFV-208ENST00000521529 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
H2AFV-208ENST00000521529 COL9A1P20849 921 aa10.96□□□□□ -0.65
H2AFV-208ENST00000521529 DDX12PQ92771 950 aa10.96□□□□□ -0.65
H2AFV-208ENST00000521529 KDM6BO15054 1643 aa10.95□□□□□ -0.66
H2AFV-208ENST00000521529 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
H2AFV-208ENST00000521529 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
H2AFV-208ENST00000521529 C6orf132Q5T0Z8 1188 aa10.92□□□□□ -0.66
H2AFV-208ENST00000521529 CUX1P39880 1505 aa10.92□□□□□ -0.66
H2AFV-208ENST00000521529 GRIN2AQ12879 1464 aa10.92□□□□□ -0.66
H2AFV-208ENST00000521529 HECW2Q9P2P5 1572 aa10.91□□□□□ -0.66
H2AFV-208ENST00000521529 NBR1Q14596 966 aa10.9□□□□□ -0.66
H2AFV-208ENST00000521529 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
H2AFV-208ENST00000521529 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
H2AFV-208ENST00000521529 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
H2AFV-208ENST00000521529 KCTD12Q96CX2 325 aaKnown RBP10.89□□□□□ -0.67
H2AFV-208ENST00000521529 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
H2AFV-208ENST00000521529 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
H2AFV-208ENST00000521529 ADGRL1O94910 1474 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms