RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SMG6Q86US8 1419 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 SYCP2Q9BX26 1530 aa11.54□□□□□ -0.56
CTNNA1-210ENST00000518825 RNF123Q5XPI4 1314 aa11.54□□□□□ -0.56
CTNNA1-210ENST00000518825 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
CTNNA1-210ENST00000518825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTNNA1-210ENST00000518825 TRPM1Q7Z4N2 1603 aa11.53□□□□□ -0.56
CTNNA1-210ENST00000518825 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
CTNNA1-210ENST00000518825 CHD1O14646 1710 aa11.53□□□□□ -0.56
CTNNA1-210ENST00000518825 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-210ENST00000518825 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-210ENST00000518825 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.57
CTNNA1-210ENST00000518825 UNC13BO14795 1591 aa11.52□□□□□ -0.57
CTNNA1-210ENST00000518825 SHROOM2Q13796 1616 aa11.51□□□□□ -0.57
CTNNA1-210ENST00000518825 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
CTNNA1-210ENST00000518825 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
CTNNA1-210ENST00000518825 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
CTNNA1-210ENST00000518825 A2MP01023 1474 aa11.5□□□□□ -0.57
CTNNA1-210ENST00000518825 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
CTNNA1-210ENST00000518825 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
CTNNA1-210ENST00000518825 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-210ENST00000518825 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
CTNNA1-210ENST00000518825 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
CTNNA1-210ENST00000518825 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 PLXNC1O60486 1568 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 TESK2Q96S53 571 aa11.47□□□□□ -0.57
CTNNA1-210ENST00000518825 BRD4O60885 1362 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-210ENST00000518825 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.57
CTNNA1-210ENST00000518825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.582e-7■■□□□ 13.3
CTNNA1-210ENST00000518825 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.58
CTNNA1-210ENST00000518825 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
CTNNA1-210ENST00000518825 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.58
CTNNA1-210ENST00000518825 PRDM15P57071 1507 aaPredicted RBP11.46□□□□□ -0.58
CTNNA1-210ENST00000518825 ABCC2Q92887 1545 aa11.45□□□□□ -0.58
CTNNA1-210ENST00000518825 RALBP1Q15311 655 aa11.44□□□□□ -0.58
CTNNA1-210ENST00000518825 ATP10AO60312 1499 aa11.44□□□□□ -0.58
CTNNA1-210ENST00000518825 LAMC1P11047 1609 aa11.44□□□□□ -0.58
CTNNA1-210ENST00000518825 COL17A1Q9UMD9 1497 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-210ENST00000518825 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-210ENST00000518825 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-210ENST00000518825 DUOX2Q9NRD8 1548 aa11.42□□□□□ -0.58
CTNNA1-210ENST00000518825 PLCH2O75038 1416 aa11.41□□□□□ -0.58
CTNNA1-210ENST00000518825 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
CTNNA1-210ENST00000518825 ZCCHC11Q5TAX3 1644 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-210ENST00000518825 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
CTNNA1-210ENST00000518825 RNF17Q9BXT8 1623 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-210ENST00000518825 NLRP13Q86W25 1043 aa11.39□□□□□ -0.59
CTNNA1-210ENST00000518825 ABCC1P33527 1531 aa11.39□□□□□ -0.59
CTNNA1-210ENST00000518825 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-210ENST00000518825 PANK3Q9H999 370 aa11.38□□□□□ -0.59
CTNNA1-210ENST00000518825 CC2D1BQ5T0F9 858 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-210ENST00000518825 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
CTNNA1-210ENST00000518825 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-210ENST00000518825 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
CTNNA1-210ENST00000518825 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-210ENST00000518825 MADDQ8WXG6 1647 aa11.36□□□□□ -0.59
CTNNA1-210ENST00000518825 WDR7Q9Y4E6 1490 aa11.36□□□□□ -0.59
CTNNA1-210ENST00000518825 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
CTNNA1-210ENST00000518825 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
CTNNA1-210ENST00000518825 EXOC6Q8TAG9 804 aa11.35□□□□□ -0.59
CTNNA1-210ENST00000518825 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-210ENST00000518825 UHRF1BP1LA0JNW5 1464 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 WASHC2CQ9Y4E1 1318 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 AEBP2Q6ZN18 517 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 RCAN3Q9UKA8 241 aa11.34□□□□□ -0.59
CTNNA1-210ENST00000518825 ZFYVE16Q7Z3T8 1539 aa11.33□□□□□ -0.6
CTNNA1-210ENST00000518825 EFCAB2Q5VUJ9 269 aa11.33□□□□□ -0.6
CTNNA1-210ENST00000518825 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
CTNNA1-210ENST00000518825 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-210ENST00000518825 TRPM2O94759 1503 aa11.32□□□□□ -0.6
CTNNA1-210ENST00000518825 PTPRTO14522 1441 aa11.32□□□□□ -0.6
CTNNA1-210ENST00000518825 DEPDC5O75140 1603 aa11.32□□□□□ -0.6
CTNNA1-210ENST00000518825 TMF1P82094 1093 aa11.32□□□□□ -0.6
CTNNA1-210ENST00000518825 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
CTNNA1-210ENST00000518825 CEP152O94986 1710 aa11.31□□□□□ -0.6
CTNNA1-210ENST00000518825 ZMYM4Q5VZL5 1548 aa11.31□□□□□ -0.6
CTNNA1-210ENST00000518825 INSRP06213 1382 aa11.3□□□□□ -0.6
CTNNA1-210ENST00000518825 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
CTNNA1-210ENST00000518825 PLIN1O60240 522 aa11.3□□□□□ -0.6
CTNNA1-210ENST00000518825 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 MYOM1P52179 1685 aa11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 ADAMTS8Q9UP79 889 aa11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 SPAG9O60271 1321 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
CTNNA1-210ENST00000518825 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
CTNNA1-210ENST00000518825 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
CTNNA1-210ENST00000518825 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.6
CTNNA1-210ENST00000518825 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.6
CTNNA1-210ENST00000518825 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
CTNNA1-210ENST00000518825 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
CTNNA1-210ENST00000518825 PPP2R1AP30153 589 aa11.27□□□□□ -0.61
CTNNA1-210ENST00000518825 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms