RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 BCANQ96GW7 911 aa11.08□□□□□ -0.64
CPS1-210ENST00000518043 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
CPS1-210ENST00000518043 SAMD9Q5K651 1589 aa11.07□□□□□ -0.64
CPS1-210ENST00000518043 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
CPS1-210ENST00000518043 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 C2orf72A6NCS6 295 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 E2F4Q16254 413 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 CLIP1P30622 1438 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 ARAP1Q96P48 1450 aa11.06□□□□□ -0.64
CPS1-210ENST00000518043 KIAA0586Q9BVV6 1533 aa11.05□□□□□ -0.64
CPS1-210ENST00000518043 KIF3CO14782 793 aa11.05□□□□□ -0.64
CPS1-210ENST00000518043 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
CPS1-210ENST00000518043 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
CPS1-210ENST00000518043 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
CPS1-210ENST00000518043 DSG2Q14126 1118 aa11.04□□□□□ -0.64
CPS1-210ENST00000518043 UGGT2Q9NYU1 1516 aa11.04□□□□□ -0.64
CPS1-210ENST00000518043 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
CPS1-210ENST00000518043 FOXK1P85037 733 aa11.03□□□□□ -0.64
CPS1-210ENST00000518043 EFCAB5A4FU69 1503 aa11.03□□□□□ -0.64
CPS1-210ENST00000518043 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
CPS1-210ENST00000518043 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.65
CPS1-210ENST00000518043 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
CPS1-210ENST00000518043 DISP1Q96F81 1524 aa11□□□□□ -0.65
CPS1-210ENST00000518043 POTEJP0CG39 1038 aa11□□□□□ -0.65
CPS1-210ENST00000518043 CAMK2BQ13554 666 aa11□□□□□ -0.65
CPS1-210ENST00000518043 NBR1Q14596 966 aa11□□□□□ -0.65
CPS1-210ENST00000518043 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
CPS1-210ENST00000518043 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
CPS1-210ENST00000518043 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
CPS1-210ENST00000518043 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
CPS1-210ENST00000518043 VPS8Q8N3P4 1428 aa10.96□□□□□ -0.65
CPS1-210ENST00000518043 ERCC6L2Q5T890 1561 aa10.95□□□□□ -0.66
CPS1-210ENST00000518043 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
CPS1-210ENST00000518043 PCF11O94913 1555 aaKnown RBP10.94□□□□□ -0.66
CPS1-210ENST00000518043 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
CPS1-210ENST00000518043 EMILIN3Q9NT22 766 aa10.92□□□□□ -0.66
CPS1-210ENST00000518043 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
CPS1-210ENST00000518043 LRRIQ1Q96JM4 1722 aa10.92□□□□□ -0.66
CPS1-210ENST00000518043 MAMSTRQ6ZN01 415 aa10.91□□□□□ -0.66
CPS1-210ENST00000518043 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
CPS1-210ENST00000518043 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
CPS1-210ENST00000518043 CFAP43Q8NDM7 1665 aa10.88□□□□□ -0.67
CPS1-210ENST00000518043 CASKIN1Q8WXD9 1431 aa10.87□□□□□ -0.67
CPS1-210ENST00000518043 DPYSL4O14531 572 aa10.87□□□□□ -0.67
CPS1-210ENST00000518043 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
CPS1-210ENST00000518043 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
CPS1-210ENST00000518043 FMN1Q68DA7 1419 aa10.86□□□□□ -0.67
CPS1-210ENST00000518043 ABCA8O94911 1581 aa10.86□□□□□ -0.67
CPS1-210ENST00000518043 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPS1-210ENST00000518043 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
CPS1-210ENST00000518043 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
CPS1-210ENST00000518043 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
CPS1-210ENST00000518043 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
CPS1-210ENST00000518043 SEMA3EO15041 775 aa10.83□□□□□ -0.68
CPS1-210ENST00000518043 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
CPS1-210ENST00000518043 HECW1Q76N89 1606 aa10.83□□□□□ -0.68
CPS1-210ENST00000518043 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
CPS1-210ENST00000518043 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
CPS1-210ENST00000518043 PLB1Q6P1J6 1458 aa10.82□□□□□ -0.68
CPS1-210ENST00000518043 SLC34A2O95436 690 aa10.82□□□□□ -0.68
CPS1-210ENST00000518043 LHX8Q68G74 356 aa10.82□□□□□ -0.68
CPS1-210ENST00000518043 PDIA6Q15084 440 aa10.81□□□□□ -0.68
CPS1-210ENST00000518043 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
CPS1-210ENST00000518043 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
CPS1-210ENST00000518043 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
CPS1-210ENST00000518043 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
CPS1-210ENST00000518043 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
CPS1-210ENST00000518043 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
CPS1-210ENST00000518043 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
CPS1-210ENST00000518043 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
CPS1-210ENST00000518043 TBC1D12O60347 775 aa10.78□□□□□ -0.68
CPS1-210ENST00000518043 PTPRGP23470 1445 aa10.77□□□□□ -0.68
CPS1-210ENST00000518043 ABCC2Q92887 1545 aa10.77□□□□□ -0.69
CPS1-210ENST00000518043 RIMBP3CA6NJZ7 1639 aa10.76□□□□□ -0.69
CPS1-210ENST00000518043 RIMBP3BA6NNM3 1639 aa10.76□□□□□ -0.69
CPS1-210ENST00000518043 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
CPS1-210ENST00000518043 RIMBP3Q9UFD9 1639 aa10.76□□□□□ -0.69
CPS1-210ENST00000518043 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
CPS1-210ENST00000518043 CCDC18Q5T9S5 1454 aa10.75□□□□□ -0.69
CPS1-210ENST00000518043 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
CPS1-210ENST00000518043 HOXB3P14651 431 aaPredicted RBP10.75□□□□□ -0.69
CPS1-210ENST00000518043 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
CPS1-210ENST00000518043 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
CPS1-210ENST00000518043 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
CPS1-210ENST00000518043 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
CPS1-210ENST00000518043 EVI5O60447 810 aa10.74□□□□□ -0.69
CPS1-210ENST00000518043 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
CPS1-210ENST00000518043 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
CPS1-210ENST00000518043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
CPS1-210ENST00000518043 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
CPS1-210ENST00000518043 SMYD5Q6GMV2 418 aa10.72□□□□□ -0.69
CPS1-210ENST00000518043 ATP10BO94823 1461 aa10.72□□□□□ -0.69
CPS1-210ENST00000518043 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
CPS1-210ENST00000518043 ZCCHC11Q5TAX3 1644 aaKnown RBP10.71□□□□□ -0.69
CPS1-210ENST00000518043 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.69
CPS1-210ENST00000518043 KDM5BQ9UGL1 1544 aa10.71□□□□□ -0.69
CPS1-210ENST00000518043 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
CPS1-210ENST00000518043 RIMBP2O15034 1052 aa10.7□□□□□ -0.7
CPS1-210ENST00000518043 SNPHO15079 494 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms