RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SPOCK3Q9BQ16 436 aa2.06□□□□□ -2.08
SNORA40.16-201ENST00000517238 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.06□□□□□ -2.08
SNORA40.16-201ENST00000517238 BHMG1C9JSJ3 638 aaPredicted RBP2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 TNFRSF10AO00220 468 aa2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 BCAMP50895 628 aa2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 ANKK1Q8NFD2 765 aa2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 FOXD4L1Q9NU39 408 aa2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 PCDHB8Q9UN66 801 aa2.05□□□□□ -2.08
SNORA40.16-201ENST00000517238 ATXN8OSP0DMR3 200 aa2.04□□□□□ -2.08
SNORA40.16-201ENST00000517238 WBP1LQ9NX94 342 aa2.04□□□□□ -2.08
SNORA40.16-201ENST00000517238 NXF1Q9UBU9 619 aaKnown RBP2.04□□□□□ -2.08
SNORA40.16-201ENST00000517238 CCER1Q8TC90 406 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.16-201ENST00000517238 NBPF3Q9H094 633 aa2.03□□□□□ -2.08
SNORA40.16-201ENST00000517238 ADAMTS8Q9UP79 889 aa2.03□□□□□ -2.08
SNORA40.16-201ENST00000517238 ERBB4Q15303 1308 aa2.02□□□□□ -2.09
SNORA40.16-201ENST00000517238 VEGFBP49765 207 aa2.02□□□□□ -2.09
SNORA40.16-201ENST00000517238 PPP4R3BQ5MIZ7 849 aa2.02□□□□□ -2.09
SNORA40.16-201ENST00000517238 KANK3Q6NY19 840 aa2.02□□□□□ -2.09
SNORA40.16-201ENST00000517238 TRIM47Q96LD4 638 aa2.02□□□□□ -2.09
SNORA40.16-201ENST00000517238 PLEKHG5O94827 1062 aa2.01□□□□□ -2.09
SNORA40.16-201ENST00000517238 PLA2G4EQ3MJ16 856 aa2.01□□□□□ -2.09
SNORA40.16-201ENST00000517238 SENP2Q9HC62 589 aa2.01□□□□□ -2.09
SNORA40.16-201ENST00000517238 SCO2A0A1W2PP80 73 aa2□□□□□ -2.09
SNORA40.16-201ENST00000517238 NPAS3Q8IXF0 933 aa2□□□□□ -2.09
SNORA40.16-201ENST00000517238 PCDHGA4Q9Y5G9 962 aa2□□□□□ -2.09
SNORA40.16-201ENST00000517238 SOWAHBA6NEL2 793 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 PROCP04070 461 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 GGCXP38435 758 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 SLC19A1P41440 591 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 CTC1Q2NKJ3 1217 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 MICALL2Q8IY33 904 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 SLC4A5Q9BY07 1137 aa1.99□□□□□ -2.09
SNORA40.16-201ENST00000517238 H3BM21 787 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 FURINP09958 794 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 TXKP42681 527 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 ZMYM1Q5SVZ6 1142 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 LCE5AQ5TCM9 118 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 ZNF598Q86UK7 904 aaKnown RBP1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 FAM212AQ96EL1 285 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 ATP13A2Q9NQ11 1180 aa1.98□□□□□ -2.09
SNORA40.16-201ENST00000517238 AVPP01185 164 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 PYGBP11216 843 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 ZNF697Q5TEC3 545 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 SPRYD7Q5W111 196 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 NBPF11Q86T75 865 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 KIFC2Q96AC6 838 aa1.97□□□□□ -2.09
SNORA40.16-201ENST00000517238 GDF9O60383 454 aa1.96□□□□□ -2.1
SNORA40.16-201ENST00000517238 RGS19P49795 217 aa1.96□□□□□ -2.1
SNORA40.16-201ENST00000517238 BAG6P46379 1132 aa1.95□□□□□ -2.1
SNORA40.16-201ENST00000517238 SMCPP49901 116 aaPredicted RBP1.95□□□□□ -2.1
SNORA40.16-201ENST00000517238 TJAP1Q5JTD0 557 aa1.95□□□□□ -2.1
SNORA40.16-201ENST00000517238 LCE4AQ5TA78 99 aa1.94□□□□□ -2.1
SNORA40.16-201ENST00000517238 PAX4O43316 350 aa1.93□□□□□ -2.1
SNORA40.16-201ENST00000517238 ITGB2P05107 769 aa1.93□□□□□ -2.1
SNORA40.16-201ENST00000517238 MARSP56192 900 aaKnown RBP1.93□□□□□ -2.1
SNORA40.16-201ENST00000517238 ZBED2Q9BTP6 218 aa1.93□□□□□ -2.1
SNORA40.16-201ENST00000517238 IL21Q9HBE4 155 aa1.93□□□□□ -2.1
SNORA40.16-201ENST00000517238 PSEN1P49768 467 aa1.92□□□□□ -2.1
SNORA40.16-201ENST00000517238 SCARF2Q96GP6 870 aaPredicted RBP1.92□□□□□ -2.1
SNORA40.16-201ENST00000517238 ZFP64Q9NPA5 681 aa1.92□□□□□ -2.1
SNORA40.16-201ENST00000517238 CABP2Q9NPB3 220 aa1.92□□□□□ -2.1
SNORA40.16-201ENST00000517238 TSR3Q9UJK0 312 aaKnown RBP1.92□□□□□ -2.1
SNORA40.16-201ENST00000517238 ZNF467Q7Z7K2 595 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 LSRQ86X29 649 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 EMID1Q96A84 441 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 MTRQ99707 1265 aa1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 TMUB1Q9BVT8 246 aa1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 HPS5Q9UPZ3 1129 aa1.91□□□□□ -2.1
SNORA40.16-201ENST00000517238 SLC34A2O95436 690 aa1.9□□□□□ -2.11
SNORA40.16-201ENST00000517238 NUBP1P53384 320 aa1.9□□□□□ -2.11
SNORA40.16-201ENST00000517238 MIER1Q8N108 512 aa1.9□□□□□ -2.11
SNORA40.16-201ENST00000517238 SVOPQ8N4V2 548 aa1.9□□□□□ -2.11
SNORA40.16-201ENST00000517238 DCAF5Q96JK2 942 aa1.9□□□□□ -2.11
SNORA40.16-201ENST00000517238 PSPNO60542 156 aa1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 FOXC1Q12948 553 aa1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 MCTP1Q6DN14 999 aa1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 NKX2-3Q8TAU0 364 aa1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 ZNF516Q92618 1163 aa1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 ZFRQ96KR1 1074 aaKnown RBP1.89□□□□□ -2.11
SNORA40.16-201ENST00000517238 VSIG8P0DPA2 414 aa1.87□□□□□ -2.11
SNORA40.16-201ENST00000517238 KCNA4P22459 653 aa1.87□□□□□ -2.11
SNORA40.16-201ENST00000517238 PTPREP23469 700 aa1.87□□□□□ -2.11
SNORA40.16-201ENST00000517238 ARTNQ5T4W7 220 aa1.87□□□□□ -2.11
SNORA40.16-201ENST00000517238 KDM4FA0A1W2PPD8 638 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 COL9A1P20849 921 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 ITGB7P26010 798 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 JAG1P78504 1218 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 LAPTM4BQ86VI4 370 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 CYP4X1Q8N118 509 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 BCL2L12Q9HB09 334 aa1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.86□□□□□ -2.11
SNORA40.16-201ENST00000517238 SPDYE4A6NLX3 237 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 RNF223E7ERA6 249 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 ZNF385CQ66K41 422 aaPredicted RBP1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 LMOD2Q6P5Q4 547 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 LIAT1Q6ZQX7 453 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 LRCH3Q96II8 777 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 FMNL2Q96PY5 1086 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 RABGEF1Q9UJ41 708 aa1.85□□□□□ -2.11
SNORA40.16-201ENST00000517238 PPP4CP60510 307 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms