RNA–Protein interactions for RNA: ENST00000512479.1

PTP4A1P4-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 4, humanhuman

BASIC

Gene PTP4A1P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P4-201ENST00000512479 PPP1R3GB7ZBB8 358 aa8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 DGAT1O75907 488 aa8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 HPS5Q9UPZ3 1129 aa8.99□□□□□ -0.97
PTP4A1P4-201ENST00000512479 DSG2Q14126 1118 aa8.98□□□□□ -0.97
PTP4A1P4-201ENST00000512479 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
PTP4A1P4-201ENST00000512479 OXER1Q8TDS5 423 aa8.98□□□□□ -0.97
PTP4A1P4-201ENST00000512479 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.97□□□□□ -0.97
PTP4A1P4-201ENST00000512479 RGL2O15211 777 aa8.96□□□□□ -0.98
PTP4A1P4-201ENST00000512479 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTP4A1P4-201ENST00000512479 WIPF1O43516 503 aa8.95□□□□□ -0.98
PTP4A1P4-201ENST00000512479 PKD2Q13563 968 aa8.94□□□□□ -0.98
PTP4A1P4-201ENST00000512479 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
PTP4A1P4-201ENST00000512479 TJAP1Q5JTD0 557 aa8.94□□□□□ -0.98
PTP4A1P4-201ENST00000512479 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
PTP4A1P4-201ENST00000512479 PPP1R37O75864 691 aa8.92□□□□□ -0.98
PTP4A1P4-201ENST00000512479 KIAA1468Q9P260 1216 aa8.92□□□□□ -0.98
PTP4A1P4-201ENST00000512479 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
PTP4A1P4-201ENST00000512479 GGCXP38435 758 aa8.89□□□□□ -0.99
PTP4A1P4-201ENST00000512479 PPP4CP60510 307 aa8.88□□□□□ -0.99
PTP4A1P4-201ENST00000512479 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
PTP4A1P4-201ENST00000512479 ANO8Q9HCE9 1232 aaPredicted RBP8.88□□□□□ -0.99
PTP4A1P4-201ENST00000512479 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
PTP4A1P4-201ENST00000512479 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
PTP4A1P4-201ENST00000512479 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
PTP4A1P4-201ENST00000512479 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
PTP4A1P4-201ENST00000512479 MTRQ99707 1265 aa8.86□□□□□ -0.99
PTP4A1P4-201ENST00000512479 COL9A1P20849 921 aa8.85□□□□□ -0.99
PTP4A1P4-201ENST00000512479 FAM187AA6NFU0 413 aa8.83□□□□□ -1
PTP4A1P4-201ENST00000512479 NFX1Q12986 1120 aaKnown RBP8.83□□□□□ -1
PTP4A1P4-201ENST00000512479 EVI5O60447 810 aa8.82□□□□□ -1
PTP4A1P4-201ENST00000512479 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
PTP4A1P4-201ENST00000512479 PRR20EP86478 221 aa8.81□□□□□ -1
PTP4A1P4-201ENST00000512479 PRR20CP86479 221 aa8.81□□□□□ -1
PTP4A1P4-201ENST00000512479 PRR20DP86480 221 aa8.81□□□□□ -1
PTP4A1P4-201ENST00000512479 PRR20BP86481 221 aa8.81□□□□□ -1
PTP4A1P4-201ENST00000512479 PRR20AP86496 221 aa8.81□□□□□ -1
PTP4A1P4-201ENST00000512479 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
PTP4A1P4-201ENST00000512479 ST8SIA5O15466 376 aa8.79□□□□□ -1
PTP4A1P4-201ENST00000512479 AAASQ9NRG9 546 aa8.79□□□□□ -1
PTP4A1P4-201ENST00000512479 SLC19A1P41440 591 aa8.78□□□□□ -1
PTP4A1P4-201ENST00000512479 ZNF516Q92618 1163 aa8.78□□□□□ -1
PTP4A1P4-201ENST00000512479 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
PTP4A1P4-201ENST00000512479 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
PTP4A1P4-201ENST00000512479 C11orf95C9JLR9 678 aaPredicted RBP8.74□□□□□ -1.01
PTP4A1P4-201ENST00000512479 CHGAP10645 457 aaKnown RBP8.74□□□□□ -1.01
PTP4A1P4-201ENST00000512479 NKX2-3Q8TAU0 364 aa8.74□□□□□ -1.01
PTP4A1P4-201ENST00000512479 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
PTP4A1P4-201ENST00000512479 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
PTP4A1P4-201ENST00000512479 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
PTP4A1P4-201ENST00000512479 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
PTP4A1P4-201ENST00000512479 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.02
PTP4A1P4-201ENST00000512479 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
PTP4A1P4-201ENST00000512479 DNAJC5Q9H3Z4 198 aa8.69□□□□□ -1.02
PTP4A1P4-201ENST00000512479 TNFRSF10AO00220 468 aa8.68□□□□□ -1.02
PTP4A1P4-201ENST00000512479 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
PTP4A1P4-201ENST00000512479 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
PTP4A1P4-201ENST00000512479 ZNF697Q5TEC3 545 aa8.66□□□□□ -1.02
PTP4A1P4-201ENST00000512479 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
PTP4A1P4-201ENST00000512479 PHF14O94880 888 aa8.65□□□□□ -1.02
PTP4A1P4-201ENST00000512479 SAMD7Q7Z3H4 446 aa8.65□□□□□ -1.02
PTP4A1P4-201ENST00000512479 PACS2Q86VP3 889 aa8.65□□□□□ -1.02
PTP4A1P4-201ENST00000512479 CRIPAKQ8N1N5 446 aa8.65□□□□□ -1.02
PTP4A1P4-201ENST00000512479 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
PTP4A1P4-201ENST00000512479 GDF9O60383 454 aa8.64□□□□□ -1.03
PTP4A1P4-201ENST00000512479 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1P4-201ENST00000512479 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
PTP4A1P4-201ENST00000512479 DACH1Q9UI36 760 aa8.64□□□□□ -1.03
PTP4A1P4-201ENST00000512479 PDE4AP27815 886 aa8.62□□□□□ -1.03
PTP4A1P4-201ENST00000512479 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
PTP4A1P4-201ENST00000512479 EMID1Q96A84 441 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1P4-201ENST00000512479 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
PTP4A1P4-201ENST00000512479 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
PTP4A1P4-201ENST00000512479 AXIN1O15169 862 aa8.6□□□□□ -1.03
PTP4A1P4-201ENST00000512479 COPS2P61201 443 aa8.6□□□□□ -1.03
PTP4A1P4-201ENST00000512479 APLP1P51693 650 aa8.59□□□□□ -1.03
PTP4A1P4-201ENST00000512479 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
PTP4A1P4-201ENST00000512479 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
PTP4A1P4-201ENST00000512479 RNF40O75150 1001 aa8.56□□□□□ -1.04
PTP4A1P4-201ENST00000512479 ZPR1O75312 459 aa8.56□□□□□ -1.04
PTP4A1P4-201ENST00000512479 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
PTP4A1P4-201ENST00000512479 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
PTP4A1P4-201ENST00000512479 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
PTP4A1P4-201ENST00000512479 EPAS1Q99814 870 aa8.55□□□□□ -1.04
PTP4A1P4-201ENST00000512479 AVPP01185 164 aa8.54□□□□□ -1.04
PTP4A1P4-201ENST00000512479 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
PTP4A1P4-201ENST00000512479 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
PTP4A1P4-201ENST00000512479 LARP6Q9BRS8 491 aaKnown RBP8.54□□□□□ -1.04
PTP4A1P4-201ENST00000512479 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
PTP4A1P4-201ENST00000512479 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
PTP4A1P4-201ENST00000512479 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
PTP4A1P4-201ENST00000512479 GTPBP6O43824 516 aaPredicted RBP8.5□□□□□ -1.05
PTP4A1P4-201ENST00000512479 MFSD10Q14728 455 aa8.5□□□□□ -1.05
PTP4A1P4-201ENST00000512479 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
PTP4A1P4-201ENST00000512479 SMAPO00193 183 aa8.49□□□□□ -1.05
PTP4A1P4-201ENST00000512479 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1P4-201ENST00000512479 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms