RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CD109Q6YHK3 1445 aa3.25□□□□□ -1.89
TRAPPC13-211ENST00000512009 RREB1Q92766 1687 aa3.25□□□□□ -1.89
TRAPPC13-211ENST00000512009 ATP7AQ04656 1500 aa3.25□□□□□ -1.89
TRAPPC13-211ENST00000512009 ASXL2Q76L83 1435 aa3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 TNIKQ9UKE5 1360 aa3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 WNK3Q9BYP7 1800 aa3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 PTPRGP23470 1445 aa3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 ADGRB2O60241 1585 aa3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 MED1Q15648 1581 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-211ENST00000512009 AKNAQ7Z591 1439 aa3.23□□□□□ -1.89
TRAPPC13-211ENST00000512009 KDM4FA0A1W2PPD8 638 aa3.23□□□□□ -1.89
TRAPPC13-211ENST00000512009 TRPM2O94759 1503 aa3.23□□□□□ -1.89
TRAPPC13-211ENST00000512009 SETBP1Q9Y6X0 1596 aa3.23□□□□□ -1.89
TRAPPC13-211ENST00000512009 MYOM1P52179 1685 aa3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 VIRMAQ69YN4 1812 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 COL16A1Q07092 1604 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 FGD6Q6ZV73 1430 aa3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 ANKRD26Q9UPS8 1709 aa3.22□□□□□ -1.89
TRAPPC13-211ENST00000512009 ADGRB3O60242 1522 aa3.21□□□□□ -1.89
TRAPPC13-211ENST00000512009 PLCH2O75038 1416 aa3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 NEXMIFQ5QGS0 1516 aa3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 NWD2Q9ULI1 1742 aa3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 ABCC6O95255 1503 aa3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 SUPT6HQ7KZ85 1726 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 PEAK1Q9H792 1746 aa3.21□□□□□ -1.9
TRAPPC13-211ENST00000512009 CAMTA1Q9Y6Y1 1673 aa3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 PRG4Q92954 1404 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 RRBP1Q9P2E9 1410 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 NRAPQ86VF7 1730 aa3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 PLCH1Q4KWH8 1693 aa3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 KIF1BO60333 1816 aa3.2□□□□□ -1.9
TRAPPC13-211ENST00000512009 HRCP23327 699 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 LAMA2P24043 3122 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 PTPRKQ15262 1439 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 PZPP20742 1482 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 KIAA1210Q9ULL0 1709 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 NRXN1Q9ULB1 1477 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 TOPAZ1Q8N9V7 1692 aa3.19□□□□□ -1.9
TRAPPC13-211ENST00000512009 KIF27Q86VH2 1401 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 FYCO1Q9BQS8 1478 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 GLI3P10071 1580 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 WDFY3Q8IZQ1 3526 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 SRCAPQ6ZRS2 3230 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 ARHGAP35Q9NRY4 1499 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 NKTRP30414 1462 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 RPRD2Q5VT52 1461 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 CNTLNQ9NXG0 1405 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 TRPM3Q9HCF6 1732 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 UNC80Q8N2C7 3258 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 NOS1P29475 1434 aa3.18□□□□□ -1.9
TRAPPC13-211ENST00000512009 TNS1Q9HBL0 1735 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 VCANP13611 3396 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 PAPPAQ13219 1627 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 LMO7Q8WWI1 1683 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 CLIP1P30622 1438 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 ERVK-7P63135 1459 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 XIRP2A4UGR9 3374 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 TECPR2O15040 1411 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 CEP162Q5TB80 1403 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 SPATA31E1Q6ZUB1 1445 aa3.17□□□□□ -1.9
TRAPPC13-211ENST00000512009 IQGAP1P46940 1657 aa3.16□□□□□ -1.9
TRAPPC13-211ENST00000512009 ILDR1Q86SU0 546 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-211ENST00000512009 ZC3H4Q9UPT8 1303 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-211ENST00000512009 COL5A2P05997 1499 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-211ENST00000512009 CASZ1Q86V15 1759 aa3.16□□□□□ -1.9
TRAPPC13-211ENST00000512009 AFDNP55196 1824 aaKnown RBP3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 THSD7AQ9UPZ6 1657 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 A2ML1A8K2U0 1454 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 MYO15AQ9UKN7 3530 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 ALS2Q96Q42 1657 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 NLRP1Q9C000 1473 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 DISP2A7MBM2 1401 aa3.15□□□□□ -1.9
TRAPPC13-211ENST00000512009 REV3LO60673 3130 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 ADAMTS7Q9UKP4 1686 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 ZFYVE9O95405 1425 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 KIF13BQ9NQT8 1826 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 KIAA1551Q9HCM1 1747 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 DCCP43146 1447 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 NRKQ7Z2Y5 1582 aa3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 SPTBN5Q9NRC6 3674 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-211ENST00000512009 CDH23Q9H251 3354 aa3.14□□□□□ -1.91
TRAPPC13-211ENST00000512009 CLTCQ00610 1675 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-211ENST00000512009 C9orf84Q5VXU9 1444 aa3.14□□□□□ -1.91
TRAPPC13-211ENST00000512009 CASKIN1Q8WXD9 1431 aa3.14□□□□□ -1.91
TRAPPC13-211ENST00000512009 BCL9LQ86UU0 1499 aa3.14□□□□□ -1.91
TRAPPC13-211ENST00000512009 CCDC18Q5T9S5 1454 aa3.13□□□□□ -1.91
TRAPPC13-211ENST00000512009 SYCP2Q9BX26 1530 aa3.13□□□□□ -1.91
TRAPPC13-211ENST00000512009 PPLO60437 1756 aa3.13□□□□□ -1.91
TRAPPC13-211ENST00000512009 ASXL1Q8IXJ9 1541 aa3.13□□□□□ -1.91
TRAPPC13-211ENST00000512009 PPARGC1BQ86YN6 1023 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 BCL9O00512 1426 aa3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 TROQ12816 1431 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 PPP6R1Q9UPN7 881 aa3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 TDRD9Q8NDG6 1382 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 YEATS2Q9ULM3 1422 aa3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 COL18A1P39060 1754 aa3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 C1orf167Q5SNV9 1468 aa3.12□□□□□ -1.91
TRAPPC13-211ENST00000512009 CEP350Q5VT06 3117 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms