RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 DDX12PQ92771 950 aa9.61□□□□□ -0.87
HMGB1P44-201ENST00000508597 CCDC88BA6NC98 1476 aa9.6□□□□□ -0.87
HMGB1P44-201ENST00000508597 FOSBP53539 338 aa9.59□□□□□ -0.87
HMGB1P44-201ENST00000508597 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
HMGB1P44-201ENST00000508597 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
HMGB1P44-201ENST00000508597 CADPSQ9ULU8 1353 aa9.59□□□□□ -0.87
HMGB1P44-201ENST00000508597 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
HMGB1P44-201ENST00000508597 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P44-201ENST00000508597 PTGER2P43116 358 aa9.57□□□□□ -0.88
HMGB1P44-201ENST00000508597 ZNF454Q8N9F8 522 aa9.57□□□□□ -0.88
HMGB1P44-201ENST00000508597 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
HMGB1P44-201ENST00000508597 CFTRP13569 1480 aa9.55□□□□□ -0.88
HMGB1P44-201ENST00000508597 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
HMGB1P44-201ENST00000508597 AXIN2Q9Y2T1 843 aa9.55□□□□□ -0.88
HMGB1P44-201ENST00000508597 OSBPP22059 807 aa9.54□□□□□ -0.88
HMGB1P44-201ENST00000508597 ZNF687Q8N1G0 1237 aa9.54□□□□□ -0.88
HMGB1P44-201ENST00000508597 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
HMGB1P44-201ENST00000508597 JPH4Q96JJ6 628 aa9.53□□□□□ -0.88
HMGB1P44-201ENST00000508597 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
HMGB1P44-201ENST00000508597 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P44-201ENST00000508597 PHF14O94880 888 aa9.52□□□□□ -0.89
HMGB1P44-201ENST00000508597 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
HMGB1P44-201ENST00000508597 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
HMGB1P44-201ENST00000508597 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
HMGB1P44-201ENST00000508597 PSEN2P49810 448 aa9.51□□□□□ -0.89
HMGB1P44-201ENST00000508597 PRDM2Q13029 1718 aa9.51□□□□□ -0.89
HMGB1P44-201ENST00000508597 NBR1Q14596 966 aa9.5□□□□□ -0.89
HMGB1P44-201ENST00000508597 ZDHHC16Q969W1 377 aa9.5□□□□□ -0.89
HMGB1P44-201ENST00000508597 NESP48681 1621 aa9.49□□□□□ -0.89
HMGB1P44-201ENST00000508597 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
HMGB1P44-201ENST00000508597 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
HMGB1P44-201ENST00000508597 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
HMGB1P44-201ENST00000508597 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
HMGB1P44-201ENST00000508597 COL9A1P20849 921 aa9.47□□□□□ -0.89
HMGB1P44-201ENST00000508597 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
HMGB1P44-201ENST00000508597 PSDA5PKW4 1024 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P44-201ENST00000508597 EPAS1Q99814 870 aa9.46□□□□□ -0.9
HMGB1P44-201ENST00000508597 CDHR5Q9HBB8 845 aa9.46□□□□□ -0.9
HMGB1P44-201ENST00000508597 EN1Q05925 392 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P44-201ENST00000508597 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
HMGB1P44-201ENST00000508597 RBM26Q5T8P6 1007 aaKnown RBP9.45□□□□□ -0.9
HMGB1P44-201ENST00000508597 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
HMGB1P44-201ENST00000508597 ERCC6Q03468 1493 aa9.45□□□□□ -0.9
HMGB1P44-201ENST00000508597 FANCD2Q9BXW9 1451 aa9.44□□□□□ -0.9
HMGB1P44-201ENST00000508597 CEP164Q9UPV0 1460 aa9.43□□□□□ -0.9
HMGB1P44-201ENST00000508597 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
HMGB1P44-201ENST00000508597 MAP3K7O43318 606 aa9.42□□□□□ -0.9
HMGB1P44-201ENST00000508597 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
HMGB1P44-201ENST00000508597 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P44-201ENST00000508597 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
HMGB1P44-201ENST00000508597 PTPREP23469 700 aa9.4□□□□□ -0.9
HMGB1P44-201ENST00000508597 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
HMGB1P44-201ENST00000508597 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
HMGB1P44-201ENST00000508597 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
HMGB1P44-201ENST00000508597 PBX2P40425 430 aa9.38□□□□□ -0.91
HMGB1P44-201ENST00000508597 PROX2Q3B8N5 592 aa9.38□□□□□ -0.91
HMGB1P44-201ENST00000508597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMGB1P44-201ENST00000508597 MRC2Q9UBG0 1479 aa9.38□□□□□ -0.91
HMGB1P44-201ENST00000508597 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
HMGB1P44-201ENST00000508597 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
HMGB1P44-201ENST00000508597 C3orf80F5H4A9 247 aa9.36□□□□□ -0.91
HMGB1P44-201ENST00000508597 THOC2Q8NI27 1593 aaKnown RBP9.36□□□□□ -0.91
HMGB1P44-201ENST00000508597 NUTM2FA1L443 756 aa9.35□□□□□ -0.91
HMGB1P44-201ENST00000508597 WDR62O43379 1518 aa9.35□□□□□ -0.91
HMGB1P44-201ENST00000508597 CUX2O14529 1486 aa9.34□□□□□ -0.91
HMGB1P44-201ENST00000508597 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
HMGB1P44-201ENST00000508597 GPR37O15354 613 aa9.34□□□□□ -0.91
HMGB1P44-201ENST00000508597 VPS9D1Q9Y2B5 631 aa9.34□□□□□ -0.91
HMGB1P44-201ENST00000508597 PTGDRQ13258 359 aa9.33□□□□□ -0.92
HMGB1P44-201ENST00000508597 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
HMGB1P44-201ENST00000508597 DNMBPQ6XZF7 1577 aa9.33□□□□□ -0.92
HMGB1P44-201ENST00000508597 FECHP22830 423 aa9.32□□□□□ -0.92
HMGB1P44-201ENST00000508597 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
HMGB1P44-201ENST00000508597 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
HMGB1P44-201ENST00000508597 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
HMGB1P44-201ENST00000508597 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
HMGB1P44-201ENST00000508597 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
HMGB1P44-201ENST00000508597 HRO43593 1189 aa9.31□□□□□ -0.92
HMGB1P44-201ENST00000508597 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
HMGB1P44-201ENST00000508597 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
HMGB1P44-201ENST00000508597 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
HMGB1P44-201ENST00000508597 PRSS12P56730 875 aa9.29□□□□□ -0.92
HMGB1P44-201ENST00000508597 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
HMGB1P44-201ENST00000508597 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
HMGB1P44-201ENST00000508597 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P44-201ENST00000508597 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
HMGB1P44-201ENST00000508597 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
HMGB1P44-201ENST00000508597 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
HMGB1P44-201ENST00000508597 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
HMGB1P44-201ENST00000508597 CUX1P39880 1505 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 TRIM6-TRIM34B2RNG4 842 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 TK2O00142 265 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 SMAPO00193 183 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 TTC13Q8NBP0 860 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
HMGB1P44-201ENST00000508597 GPIHBP1Q8IV16 184 aa9.26□□□□□ -0.93
HMGB1P44-201ENST00000508597 KCNH8Q96L42 1107 aa9.26□□□□□ -0.93
HMGB1P44-201ENST00000508597 FCHSD2O94868 740 aa9.25□□□□□ -0.93
HMGB1P44-201ENST00000508597 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
HMGB1P44-201ENST00000508597 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms