RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
MACF1-226ENST00000497964 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
MACF1-226ENST00000497964 PMFBP1Q8TBY8 1022 aa9.13□□□□□ -0.95
MACF1-226ENST00000497964 SMC4Q9NTJ3 1288 aa9.12□□□□□ -0.95
MACF1-226ENST00000497964 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
MACF1-226ENST00000497964 FYCO1Q9BQS8 1478 aa9.12□□□□□ -0.95
MACF1-226ENST00000497964 CCDC144AA2RUR9 1427 aa9.12□□□□□ -0.95
MACF1-226ENST00000497964 PLPPR3Q6T4P5 718 aa9.11□□□□□ -0.95
MACF1-226ENST00000497964 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
MACF1-226ENST00000497964 PANK1Q8TE04 598 aa9.11□□□□□ -0.95
MACF1-226ENST00000497964 MSNP26038 577 aaKnown RBP9.1□□□□□ -0.95
MACF1-226ENST00000497964 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
MACF1-226ENST00000497964 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
MACF1-226ENST00000497964 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
MACF1-226ENST00000497964 STK26Q9P289 416 aa9.1□□□□□ -0.95
MACF1-226ENST00000497964 E9PSI1 815 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 PRKCSHP14314 528 aaPredicted RBP9.09□□□□□ -0.95
MACF1-226ENST00000497964 POGKQ9P215 609 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 GBP4Q96PP9 640 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
MACF1-226ENST00000497964 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.96
MACF1-226ENST00000497964 BCAR3O75815 825 aa9.08□□□□□ -0.96
MACF1-226ENST00000497964 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
MACF1-226ENST00000497964 GAPVD1Q14C86 1478 aa9.08□□□□□ -0.96
MACF1-226ENST00000497964 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
MACF1-226ENST00000497964 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
MACF1-226ENST00000497964 GGT6Q6P531 493 aa9.07□□□□□ -0.96
MACF1-226ENST00000497964 CASC1Q6TDU7 716 aa9.07□□□□□ -0.96
MACF1-226ENST00000497964 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
MACF1-226ENST00000497964 ANKRD50Q9ULJ7 1429 aa9.07□□□□□ -0.96
MACF1-226ENST00000497964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.07□□□□□ -0.96
MACF1-226ENST00000497964 HSP90AA2PQ14568 343 aaPredicted RBP9.07□□□□□ -0.96
MACF1-226ENST00000497964 KIF3BO15066 747 aa9.06□□□□□ -0.96
MACF1-226ENST00000497964 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
MACF1-226ENST00000497964 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
MACF1-226ENST00000497964 IPO8O15397 1037 aaKnown RBP9.06□□□□□ -0.96
MACF1-226ENST00000497964 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
MACF1-226ENST00000497964 PCF11O94913 1555 aaKnown RBP9.06□□□□□ -0.96
MACF1-226ENST00000497964 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
MACF1-226ENST00000497964 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
MACF1-226ENST00000497964 SOX12O15370 315 aa9.05□□□□□ -0.96
MACF1-226ENST00000497964 ANKRD30BQ9BXX2 1392 aa9.04□□□□□ -0.96
MACF1-226ENST00000497964 PPP2R1AP30153 589 aa9.04□□□□□ -0.96
MACF1-226ENST00000497964 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■■■■□ 20.8
MACF1-226ENST00000497964 EFCAB2Q5VUJ9 269 aa9.03□□□□□ -0.96
MACF1-226ENST00000497964 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
MACF1-226ENST00000497964 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
MACF1-226ENST00000497964 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
MACF1-226ENST00000497964 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
MACF1-226ENST00000497964 KANK1Q14678 1352 aa9.02□□□□□ -0.96
MACF1-226ENST00000497964 ANKRD45Q5TZF3 282 aa9.02□□□□□ -0.96
MACF1-226ENST00000497964 CALD1Q05682 793 aaKnown RBP9.02□□□□□ -0.97
MACF1-226ENST00000497964 DDX49Q9Y6V7 483 aaKnown RBP9.02□□□□□ -0.97
MACF1-226ENST00000497964 MIA2Q96PC5 1412 aa9.02□□□□□ -0.97
MACF1-226ENST00000497964 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
MACF1-226ENST00000497964 CHMP5Q9NZZ3 219 aa9.02□□□□□ -0.97
MACF1-226ENST00000497964 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
MACF1-226ENST00000497964 C22orf23Q9BZE7 217 aa9.02□□□□□ -0.97
MACF1-226ENST00000497964 KIAA1107Q9UPP5 1409 aa9.01□□□□□ -0.97
MACF1-226ENST00000497964 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
MACF1-226ENST00000497964 LNPKQ9C0E8 428 aa9.01□□□□□ -0.97
MACF1-226ENST00000497964 DDX11L8A8MPP1 907 aa9.01□□□□□ -0.97
MACF1-226ENST00000497964 EIF3AQ14152 1382 aaKnown RBP9.01□□□□□ -0.97
MACF1-226ENST00000497964 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
MACF1-226ENST00000497964 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
MACF1-226ENST00000497964 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
MACF1-226ENST00000497964 MAP3K1Q13233 1512 aa9□□□□□ -0.97
MACF1-226ENST00000497964 SPAG9O60271 1321 aaKnown RBP9□□□□□ -0.97
MACF1-226ENST00000497964 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
MACF1-226ENST00000497964 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
MACF1-226ENST00000497964 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
MACF1-226ENST00000497964 NESP48681 1621 aa8.99□□□□□ -0.97
MACF1-226ENST00000497964 TRAK2O60296 914 aa8.99□□□□□ -0.97
MACF1-226ENST00000497964 DAPK1P53355 1430 aa8.99□□□□□ -0.97
MACF1-226ENST00000497964 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
MACF1-226ENST00000497964 TCP11L2Q8N4U5 519 aa8.99□□□□□ -0.97
MACF1-226ENST00000497964 PRG4Q92954 1404 aaPredicted RBP8.99□□□□□ -0.97
MACF1-226ENST00000497964 CDK13Q14004 1512 aaKnown RBP8.98□□□□□ -0.97
MACF1-226ENST00000497964 EHBP1L1Q8N3D4 1523 aa8.98□□□□□ -0.97
MACF1-226ENST00000497964 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
MACF1-226ENST00000497964 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
MACF1-226ENST00000497964 FAM43AQ8N2R8 423 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 RUNDC1Q96C34 613 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 MTHFSP49914 203 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 WASHC2CQ9Y4E1 1318 aa8.97□□□□□ -0.97
MACF1-226ENST00000497964 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.97
MACF1-226ENST00000497964 DDX19BQ9UMR2 479 aa8.96□□□□□ -0.97
MACF1-226ENST00000497964 RPRD2Q5VT52 1461 aaKnown RBP8.96□□□□□ -0.98
MACF1-226ENST00000497964 PDE3AQ14432 1141 aa8.96□□□□□ -0.98
MACF1-226ENST00000497964 SLC4A10Q6U841 1118 aa8.96□□□□□ -0.98
MACF1-226ENST00000497964 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
MACF1-226ENST00000497964 TAOK2Q9UL54 1235 aa8.96□□□□□ -0.98
MACF1-226ENST00000497964 SUPT6HQ7KZ85 1726 aaKnown RBP8.95□□□□□ -0.98
MACF1-226ENST00000497964 PTMSP20962 102 aa8.95□□□□□ -0.98
MACF1-226ENST00000497964 KCNJ4P48050 445 aa8.95□□□□□ -0.98
MACF1-226ENST00000497964 MRE11P49959 708 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms