RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
CLIP4-211ENST00000491701 TK2O00142 265 aa7.71□□□□□ -1.17
CLIP4-211ENST00000491701 CADPS2Q86UW7 1296 aa7.69□□□□□ -1.18
CLIP4-211ENST00000491701 FOXK1P85037 733 aa7.69□□□□□ -1.18
CLIP4-211ENST00000491701 PLPP6Q8IY26 295 aa7.69□□□□□ -1.18
CLIP4-211ENST00000491701 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
CLIP4-211ENST00000491701 C14orf37Q86TY3 774 aa7.68□□□□□ -1.18
CLIP4-211ENST00000491701 KCTD12Q96CX2 325 aaKnown RBP7.68□□□□□ -1.18
CLIP4-211ENST00000491701 WDR70Q9NW82 654 aa7.67□□□□□ -1.18
CLIP4-211ENST00000491701 DSG2Q14126 1118 aa7.66□□□□□ -1.18
CLIP4-211ENST00000491701 PPP4R3BQ5MIZ7 849 aa7.66□□□□□ -1.18
CLIP4-211ENST00000491701 GPHNQ9NQX3 736 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-211ENST00000491701 BAZ1BQ9UIG0 1483 aaKnown RBP7.66□□□□□ -1.18
CLIP4-211ENST00000491701 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
CLIP4-211ENST00000491701 PDE4AP27815 886 aa7.63□□□□□ -1.19
CLIP4-211ENST00000491701 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
CLIP4-211ENST00000491701 TBC1D12O60347 775 aa7.61□□□□□ -1.19
CLIP4-211ENST00000491701 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
CLIP4-211ENST00000491701 VPS9D1Q9Y2B5 631 aa7.61□□□□□ -1.19
CLIP4-211ENST00000491701 NCKAP5LQ9HCH0 1330 aa7.6□□□□□ -1.19
CLIP4-211ENST00000491701 RANGAP1P46060 587 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-211ENST00000491701 PTPN5P54829 565 aa7.6□□□□□ -1.19
CLIP4-211ENST00000491701 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
CLIP4-211ENST00000491701 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
CLIP4-211ENST00000491701 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
CLIP4-211ENST00000491701 UPF1Q92900 1129 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLIP4-211ENST00000491701 KCNH8Q96L42 1107 aa7.57□□□□□ -1.2
CLIP4-211ENST00000491701 CRISPLD2Q9H0B8 497 aa7.57□□□□□ -1.2
CLIP4-211ENST00000491701 PPP1R15BQ5SWA1 713 aa7.56□□□□□ -1.2
CLIP4-211ENST00000491701 CFTRP13569 1480 aa7.56□□□□□ -1.2
CLIP4-211ENST00000491701 BHMG1C9JSJ3 638 aaPredicted RBP7.55□□□□□ -1.2
CLIP4-211ENST00000491701 BCL2L12Q9HB09 334 aa7.55□□□□□ -1.2
CLIP4-211ENST00000491701 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
CLIP4-211ENST00000491701 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
CLIP4-211ENST00000491701 NESP48681 1621 aa7.54□□□□□ -1.2
CLIP4-211ENST00000491701 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
CLIP4-211ENST00000491701 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
CLIP4-211ENST00000491701 CUX2O14529 1486 aa7.53□□□□□ -1.2
CLIP4-211ENST00000491701 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
CLIP4-211ENST00000491701 FOSBP53539 338 aa7.52□□□□□ -1.2
CLIP4-211ENST00000491701 E2F4Q16254 413 aa7.52□□□□□ -1.21
CLIP4-211ENST00000491701 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.21
CLIP4-211ENST00000491701 ABCC8Q09428 1581 aa7.51□□□□□ -1.21
CLIP4-211ENST00000491701 RGS20O76081 388 aa7.51□□□□□ -1.21
CLIP4-211ENST00000491701 PTPREP23469 700 aa7.51□□□□□ -1.21
CLIP4-211ENST00000491701 ERCC6Q03468 1493 aa7.5□□□□□ -1.21
CLIP4-211ENST00000491701 A0A0G2JS52 829 aa7.5□□□□□ -1.21
CLIP4-211ENST00000491701 MFSD10Q14728 455 aa7.5□□□□□ -1.21
CLIP4-211ENST00000491701 WNT2BQ93097 391 aa7.5□□□□□ -1.21
CLIP4-211ENST00000491701 MRPL50Q8N5N7 158 aaKnown RBP7.49□□□□□ -1.21
CLIP4-211ENST00000491701 IRX2Q9BZI1 471 aaPredicted RBP7.49□□□□□ -1.21
CLIP4-211ENST00000491701 PRDM2Q13029 1718 aa7.49□□□□□ -1.21
CLIP4-211ENST00000491701 GOLGA8CPA6NN73 597 aa7.48□□□□□ -1.21
CLIP4-211ENST00000491701 P3H3Q8IVL6 736 aa7.48□□□□□ -1.21
CLIP4-211ENST00000491701 KCNV2Q8TDN2 545 aa7.48□□□□□ -1.21
CLIP4-211ENST00000491701 ANO8Q9HCE9 1232 aaPredicted RBP7.48□□□□□ -1.21
CLIP4-211ENST00000491701 JPH4Q96JJ6 628 aa7.47□□□□□ -1.21
CLIP4-211ENST00000491701 ADAM33Q9BZ11 813 aa7.47□□□□□ -1.21
CLIP4-211ENST00000491701 SYNJ1O43426 1573 aa7.47□□□□□ -1.21
CLIP4-211ENST00000491701 EVI5O60447 810 aa7.45□□□□□ -1.22
CLIP4-211ENST00000491701 MAP3K9P80192 1104 aa7.45□□□□□ -1.22
CLIP4-211ENST00000491701 ZDHHC16Q969W1 377 aa7.45□□□□□ -1.22
CLIP4-211ENST00000491701 CUX1P39880 1505 aa7.45□□□□□ -1.22
CLIP4-211ENST00000491701 DPYSL4O14531 572 aa7.44□□□□□ -1.22
CLIP4-211ENST00000491701 LAMC3Q9Y6N6 1575 aa7.44□□□□□ -1.22
CLIP4-211ENST00000491701 RUSC2Q8N2Y8 1516 aa7.44□□□□□ -1.22
CLIP4-211ENST00000491701 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
CLIP4-211ENST00000491701 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
CLIP4-211ENST00000491701 BIVM-ERCC5R4GMW8 1640 aa7.42□□□□□ -1.22
CLIP4-211ENST00000491701 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
CLIP4-211ENST00000491701 FANCD2Q9BXW9 1451 aa7.41□□□□□ -1.22
CLIP4-211ENST00000491701 CAMK2BQ13554 666 aa7.41□□□□□ -1.22
CLIP4-211ENST00000491701 PROX2Q3B8N5 592 aa7.41□□□□□ -1.22
CLIP4-211ENST00000491701 ARHGEF1Q92888 912 aaKnown RBP7.41□□□□□ -1.22
CLIP4-211ENST00000491701 TOP2BQ02880 1626 aa7.41□□□□□ -1.22
CLIP4-211ENST00000491701 WRNQ14191 1432 aaPredicted RBP eCLIP7.41□□□□□ -1.22
CLIP4-211ENST00000491701 URB2Q14146 1524 aaKnown RBP7.4□□□□□ -1.23
CLIP4-211ENST00000491701 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
CLIP4-211ENST00000491701 COL9A1P20849 921 aa7.39□□□□□ -1.23
CLIP4-211ENST00000491701 RABGEF1Q9UJ41 708 aa7.39□□□□□ -1.23
CLIP4-211ENST00000491701 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
CLIP4-211ENST00000491701 ITGBL1O95965 494 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-211ENST00000491701 BCAMP50895 628 aa7.38□□□□□ -1.23
CLIP4-211ENST00000491701 SOGA1O94964 1423 aa7.38□□□□□ -1.23
CLIP4-211ENST00000491701 THOC2Q8NI27 1593 aaKnown RBP7.37□□□□□ -1.23
CLIP4-211ENST00000491701 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
CLIP4-211ENST00000491701 LOC105371045A0A1W2PR82 267 aa7.36□□□□□ -1.23
CLIP4-211ENST00000491701 SEMA3EO15041 775 aa7.36□□□□□ -1.23
CLIP4-211ENST00000491701 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
CLIP4-211ENST00000491701 SOWAHBA6NEL2 793 aa7.35□□□□□ -1.23
CLIP4-211ENST00000491701 GRXCR2A6NFK2 248 aa7.35□□□□□ -1.23
CLIP4-211ENST00000491701 NPM2Q86SE8 214 aaKnown RBP7.35□□□□□ -1.23
CLIP4-211ENST00000491701 DDX12PQ92771 950 aa7.35□□□□□ -1.23
CLIP4-211ENST00000491701 PDS5BQ9NTI5 1447 aa7.33□□□□□ -1.24
CLIP4-211ENST00000491701 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
CLIP4-211ENST00000491701 SPDYE16A6NNV3 312 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-211ENST00000491701 UBTFP17480 764 aaKnown RBP7.33□□□□□ -1.24
CLIP4-211ENST00000491701 BRPF1P55201 1214 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-211ENST00000491701 TRIM26Q12899 539 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-211ENST00000491701 Q6ZNB5 142 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms