RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 MEX3CQ5U5Q3 659 aaKnown RBP10.97□□□□□ -0.65
GABRE-209ENST00000486255 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
GABRE-209ENST00000486255 MFAP1P55081 439 aaKnown RBP10.96□□□□□ -0.66
GABRE-209ENST00000486255 TEX35Q5T0J7 233 aa10.95□□□□□ -0.66
GABRE-209ENST00000486255 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
GABRE-209ENST00000486255 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
GABRE-209ENST00000486255 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
GABRE-209ENST00000486255 CCER2I3L3R5 266 aa10.94□□□□□ -0.66
GABRE-209ENST00000486255 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
GABRE-209ENST00000486255 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
GABRE-209ENST00000486255 FOXD4L1Q9NU39 408 aa10.94□□□□□ -0.66
GABRE-209ENST00000486255 CREBRFQ8IUR6 639 aa10.94□□□□□ -0.66
GABRE-209ENST00000486255 APBB1O00213 710 aa10.93□□□□□ -0.66
GABRE-209ENST00000486255 CCDC34Q96HJ3 373 aa10.93□□□□□ -0.66
GABRE-209ENST00000486255 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
GABRE-209ENST00000486255 APPP05067 770 aa10.92□□□□□ -0.66
GABRE-209ENST00000486255 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
GABRE-209ENST00000486255 MAP3K1Q13233 1512 aa10.92□□□□□ -0.66
GABRE-209ENST00000486255 CCAR2Q8N163 923 aaKnown RBP10.92□□□□□ -0.66
GABRE-209ENST00000486255 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
GABRE-209ENST00000486255 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
GABRE-209ENST00000486255 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
GABRE-209ENST00000486255 GSE1Q14687 1217 aa10.91□□□□□ -0.66
GABRE-209ENST00000486255 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
GABRE-209ENST00000486255 TIAM1Q13009 1591 aa10.91□□□□□ -0.66
GABRE-209ENST00000486255 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
GABRE-209ENST00000486255 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
GABRE-209ENST00000486255 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
GABRE-209ENST00000486255 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
GABRE-209ENST00000486255 ITPRIPQ8IWB1 547 aa10.9□□□□□ -0.66
GABRE-209ENST00000486255 EHBP1L1Q8N3D4 1523 aa10.9□□□□□ -0.67
GABRE-209ENST00000486255 RAB3GAP2Q9H2M9 1393 aa10.9□□□□□ -0.67
GABRE-209ENST00000486255 RRP12Q5JTH9 1297 aaKnown RBP10.89□□□□□ -0.67
GABRE-209ENST00000486255 RCAN3Q9UKA8 241 aa10.89□□□□□ -0.67
GABRE-209ENST00000486255 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
GABRE-209ENST00000486255 KIAA0586Q9BVV6 1533 aa10.89□□□□□ -0.67
GABRE-209ENST00000486255 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
GABRE-209ENST00000486255 TAF7LQ5H9L4 462 aa10.88□□□□□ -0.67
GABRE-209ENST00000486255 FAM13BQ9NYF5 915 aa10.88□□□□□ -0.67
GABRE-209ENST00000486255 SKOR2Q2VWA4 1001 aaPredicted RBP10.88□□□□□ -0.67
GABRE-209ENST00000486255 PTPRGP23470 1445 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
GABRE-209ENST00000486255 RASSF8Q8NHQ8 419 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 POGKQ9P215 609 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 TMF1P82094 1093 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
GABRE-209ENST00000486255 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
GABRE-209ENST00000486255 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 KIF16BQ96L93 1317 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
GABRE-209ENST00000486255 TPD52L1Q16890 204 aaPredicted RBP10.86□□□□□ -0.67
GABRE-209ENST00000486255 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
GABRE-209ENST00000486255 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 GOLGA6L19H0YKK7 550 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.86□□□□□ -0.67
GABRE-209ENST00000486255 GPATCH3Q96I76 525 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 PKNOX2Q96KN3 472 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
GABRE-209ENST00000486255 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
GABRE-209ENST00000486255 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
GABRE-209ENST00000486255 ST18O60284 1047 aa10.85□□□□□ -0.67
GABRE-209ENST00000486255 ANKRD30AQ9BXX3 1397 aa10.85□□□□□ -0.67
GABRE-209ENST00000486255 PES1O00541 588 aaKnown RBP10.84□□□□□ -0.67
GABRE-209ENST00000486255 TPM2P07951 284 aa10.84□□□□□ -0.67
GABRE-209ENST00000486255 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
GABRE-209ENST00000486255 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
GABRE-209ENST00000486255 KTN1Q86UP2 1357 aaKnown RBP10.84□□□□□ -0.67
GABRE-209ENST00000486255 MORC1Q86VD1 984 aa10.84□□□□□ -0.67
GABRE-209ENST00000486255 NCOA2Q15596 1464 aa10.84□□□□□ -0.67
GABRE-209ENST00000486255 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.67
GABRE-209ENST00000486255 WDR62O43379 1518 aa10.83□□□□□ -0.68
GABRE-209ENST00000486255 TPM1P09493 284 aa10.83□□□□□ -0.68
GABRE-209ENST00000486255 GRIN2AQ12879 1464 aa10.83□□□□□ -0.68
GABRE-209ENST00000486255 CTTNBP2Q8WZ74 1663 aa10.83□□□□□ -0.68
GABRE-209ENST00000486255 DDX49Q9Y6V7 483 aaKnown RBP10.83□□□□□ -0.68
GABRE-209ENST00000486255 AK7Q96M32 723 aa10.83□□□□□ -0.68
GABRE-209ENST00000486255 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
GABRE-209ENST00000486255 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
GABRE-209ENST00000486255 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
GABRE-209ENST00000486255 PHLDB1Q86UU1 1377 aa10.82□□□□□ -0.68
GABRE-209ENST00000486255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.82□□□□□ -0.682e-19■■■■■ 47.2
GABRE-209ENST00000486255 MAP7D2Q96T17 732 aa10.81□□□□□ -0.68
GABRE-209ENST00000486255 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
GABRE-209ENST00000486255 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
GABRE-209ENST00000486255 BECN2A8MW95 431 aa10.81□□□□□ -0.68
GABRE-209ENST00000486255 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
GABRE-209ENST00000486255 CWC15Q9P013 229 aaKnown RBP10.81□□□□□ -0.68
GABRE-209ENST00000486255 H3BQV1 296 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 ADAMTS12P58397 1594 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 RUFY1Q96T51 708 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 ACBD3Q9H3P7 528 aa10.8□□□□□ -0.68
GABRE-209ENST00000486255 RDXP35241 583 aaKnown RBP10.79□□□□□ -0.68
GABRE-209ENST00000486255 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
GABRE-209ENST00000486255 ARGLU1Q9NWB6 273 aaPredicted RBP10.79□□□□□ -0.68
GABRE-209ENST00000486255 MIA2Q96PC5 1412 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms