RNA–Protein interactions for RNA: ENST00000485886.1

MVB12B-204, Transcript of multivesicular body subunit 12B, humanhuman

TSL 2

Gene MVB12B, Length 4,537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-204ENST00000485886 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
MVB12B-204ENST00000485886 PMFBP1Q8TBY8 1022 aa16.48■□□□□ 0.23
MVB12B-204ENST00000485886 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
MVB12B-204ENST00000485886 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
MVB12B-204ENST00000485886 CFTRP13569 1480 aa16.47■□□□□ 0.23
MVB12B-204ENST00000485886 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
MVB12B-204ENST00000485886 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
MVB12B-204ENST00000485886 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
MVB12B-204ENST00000485886 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
MVB12B-204ENST00000485886 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
MVB12B-204ENST00000485886 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
MVB12B-204ENST00000485886 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
MVB12B-204ENST00000485886 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
MVB12B-204ENST00000485886 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
MVB12B-204ENST00000485886 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
MVB12B-204ENST00000485886 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
MVB12B-204ENST00000485886 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
MVB12B-204ENST00000485886 CSB-PGBD3P0DP91 1061 aa16.44■□□□□ 0.22
MVB12B-204ENST00000485886 NESP48681 1621 aa16.44■□□□□ 0.22
MVB12B-204ENST00000485886 NPHP1O15259 732 aa16.44■□□□□ 0.22
MVB12B-204ENST00000485886 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
MVB12B-204ENST00000485886 MCCP23508 829 aa16.44■□□□□ 0.22
MVB12B-204ENST00000485886 AMPHP49418 695 aa16.43■□□□□ 0.22
MVB12B-204ENST00000485886 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
MVB12B-204ENST00000485886 CGNL1Q0VF96 1302 aa16.42■□□□□ 0.22
MVB12B-204ENST00000485886 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
MVB12B-204ENST00000485886 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
MVB12B-204ENST00000485886 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
MVB12B-204ENST00000485886 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
MVB12B-204ENST00000485886 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
MVB12B-204ENST00000485886 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
MVB12B-204ENST00000485886 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
MVB12B-204ENST00000485886 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
MVB12B-204ENST00000485886 CUX1P39880 1505 aa16.4■□□□□ 0.22
MVB12B-204ENST00000485886 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
MVB12B-204ENST00000485886 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
MVB12B-204ENST00000485886 E9PSI1 815 aa16.4■□□□□ 0.22
MVB12B-204ENST00000485886 PDE4AP27815 886 aa16.39■□□□□ 0.21
MVB12B-204ENST00000485886 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
MVB12B-204ENST00000485886 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
MVB12B-204ENST00000485886 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
MVB12B-204ENST00000485886 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
MVB12B-204ENST00000485886 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
MVB12B-204ENST00000485886 NBPF8Q3BBV2 869 aa16.36■□□□□ 0.21
MVB12B-204ENST00000485886 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
MVB12B-204ENST00000485886 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
MVB12B-204ENST00000485886 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
MVB12B-204ENST00000485886 COG3Q96JB2 828 aa16.35■□□□□ 0.21
MVB12B-204ENST00000485886 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
MVB12B-204ENST00000485886 HMMRO75330 724 aa16.35■□□□□ 0.21
MVB12B-204ENST00000485886 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
MVB12B-204ENST00000485886 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
MVB12B-204ENST00000485886 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
MVB12B-204ENST00000485886 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
MVB12B-204ENST00000485886 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.21
MVB12B-204ENST00000485886 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.2
MVB12B-204ENST00000485886 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.2
MVB12B-204ENST00000485886 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
MVB12B-204ENST00000485886 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
MVB12B-204ENST00000485886 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
MVB12B-204ENST00000485886 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
MVB12B-204ENST00000485886 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
MVB12B-204ENST00000485886 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
MVB12B-204ENST00000485886 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
MVB12B-204ENST00000485886 ANKRD45Q5TZF3 282 aa16.3■□□□□ 0.2
MVB12B-204ENST00000485886 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
MVB12B-204ENST00000485886 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
MVB12B-204ENST00000485886 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
MVB12B-204ENST00000485886 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
MVB12B-204ENST00000485886 CHMP3Q9Y3E7 222 aa16.29■□□□□ 0.2
MVB12B-204ENST00000485886 RIPK4P57078 832 aa16.29■□□□□ 0.2
MVB12B-204ENST00000485886 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
MVB12B-204ENST00000485886 CDCA7LQ96GN5 454 aa16.29■□□□□ 0.2
MVB12B-204ENST00000485886 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
MVB12B-204ENST00000485886 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
MVB12B-204ENST00000485886 STAC3Q96MF2 364 aa16.27■□□□□ 0.19
MVB12B-204ENST00000485886 CABP2Q9NPB3 220 aa16.27■□□□□ 0.19
MVB12B-204ENST00000485886 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
MVB12B-204ENST00000485886 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
MVB12B-204ENST00000485886 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
MVB12B-204ENST00000485886 HMOX1P09601 288 aa16.24■□□□□ 0.19
MVB12B-204ENST00000485886 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
MVB12B-204ENST00000485886 GORABQ5T7V8 394 aa16.24■□□□□ 0.19
MVB12B-204ENST00000485886 MTHFSP49914 203 aa16.23■□□□□ 0.19
MVB12B-204ENST00000485886 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
MVB12B-204ENST00000485886 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
MVB12B-204ENST00000485886 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
MVB12B-204ENST00000485886 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
MVB12B-204ENST00000485886 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
MVB12B-204ENST00000485886 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
MVB12B-204ENST00000485886 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
MVB12B-204ENST00000485886 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
MVB12B-204ENST00000485886 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
MVB12B-204ENST00000485886 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
MVB12B-204ENST00000485886 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
MVB12B-204ENST00000485886 TEFQ10587 303 aa16.2■□□□□ 0.18
MVB12B-204ENST00000485886 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
MVB12B-204ENST00000485886 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
MVB12B-204ENST00000485886 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
MVB12B-204ENST00000485886 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms