RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 KDM5DQ9BY66 1539 aa15.32■□□□□ 0.04
SEC61A1-205ENST00000483956 PDE4AP27815 886 aa15.32■□□□□ 0.04
SEC61A1-205ENST00000483956 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
SEC61A1-205ENST00000483956 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
SEC61A1-205ENST00000483956 ANKRD30AQ9BXX3 1397 aa15.31■□□□□ 0.04
SEC61A1-205ENST00000483956 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
SEC61A1-205ENST00000483956 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
SEC61A1-205ENST00000483956 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
SEC61A1-205ENST00000483956 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
SEC61A1-205ENST00000483956 PKD2Q13563 968 aa15.29■□□□□ 0.04
SEC61A1-205ENST00000483956 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
SEC61A1-205ENST00000483956 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
SEC61A1-205ENST00000483956 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
SEC61A1-205ENST00000483956 RRAGDQ9NQL2 400 aaPredicted RBP15.27■□□□□ 0.04
SEC61A1-205ENST00000483956 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
SEC61A1-205ENST00000483956 CEP170Q5SW79 1584 aa15.27■□□□□ 0.04
SEC61A1-205ENST00000483956 CDC42BPAQ5VT25 1732 aa15.27■□□□□ 0.04
SEC61A1-205ENST00000483956 BACH2Q9BYV9 841 aa15.27■□□□□ 0.04
SEC61A1-205ENST00000483956 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
SEC61A1-205ENST00000483956 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
SEC61A1-205ENST00000483956 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
SEC61A1-205ENST00000483956 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
SEC61A1-205ENST00000483956 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
SEC61A1-205ENST00000483956 RALBP1Q15311 655 aa15.24■□□□□ 0.03
SEC61A1-205ENST00000483956 ZNF326Q5BKZ1 582 aaKnown RBP15.24■□□□□ 0.03
SEC61A1-205ENST00000483956 PTPRGP23470 1445 aa15.24■□□□□ 0.03
SEC61A1-205ENST00000483956 PLB1Q6P1J6 1458 aa15.23■□□□□ 0.03
SEC61A1-205ENST00000483956 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
SEC61A1-205ENST00000483956 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
SEC61A1-205ENST00000483956 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
SEC61A1-205ENST00000483956 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
SEC61A1-205ENST00000483956 ABCC10Q5T3U5 1492 aa15.21■□□□□ 0.03
SEC61A1-205ENST00000483956 NUP155O75694 1391 aa15.21■□□□□ 0.02
SEC61A1-205ENST00000483956 RRP9O43818 475 aaKnown RBP15.21■□□□□ 0.02
SEC61A1-205ENST00000483956 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.02
SEC61A1-205ENST00000483956 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.02
SEC61A1-205ENST00000483956 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
SEC61A1-205ENST00000483956 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
SEC61A1-205ENST00000483956 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
SEC61A1-205ENST00000483956 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
SEC61A1-205ENST00000483956 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
SEC61A1-205ENST00000483956 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
SEC61A1-205ENST00000483956 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
SEC61A1-205ENST00000483956 INSRP06213 1382 aa15.18■□□□□ 0.02
SEC61A1-205ENST00000483956 PARD3Q8TEW0 1356 aa15.18■□□□□ 0.02
SEC61A1-205ENST00000483956 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
SEC61A1-205ENST00000483956 TRPM1Q7Z4N2 1603 aa15.18■□□□□ 0.02
SEC61A1-205ENST00000483956 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
SEC61A1-205ENST00000483956 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
SEC61A1-205ENST00000483956 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
SEC61A1-205ENST00000483956 ABCA8O94911 1581 aa15.17■□□□□ 0.02
SEC61A1-205ENST00000483956 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
SEC61A1-205ENST00000483956 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
SEC61A1-205ENST00000483956 LAMC1P11047 1609 aa15.16■□□□□ 0.02
SEC61A1-205ENST00000483956 MS4A1P11836 297 aa15.16■□□□□ 0.02
SEC61A1-205ENST00000483956 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
SEC61A1-205ENST00000483956 NLRP13Q86W25 1043 aa15.15■□□□□ 0.02
SEC61A1-205ENST00000483956 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
SEC61A1-205ENST00000483956 EXOC6Q8TAG9 804 aa15.14■□□□□ 0.01
SEC61A1-205ENST00000483956 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
SEC61A1-205ENST00000483956 PRAG1Q86YV5 1406 aa15.13■□□□□ 0.01
SEC61A1-205ENST00000483956 NUP160Q12769 1436 aa15.12■□□□□ 0.01
SEC61A1-205ENST00000483956 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
SEC61A1-205ENST00000483956 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
SEC61A1-205ENST00000483956 SKAP1Q86WV1 359 aa15.11■□□□□ 0.01
SEC61A1-205ENST00000483956 PNNQ9H307 717 aaKnown RBP15.11■□□□□ 0.01
SEC61A1-205ENST00000483956 COL17A1Q9UMD9 1497 aaPredicted RBP15.11■□□□□ 0.01
SEC61A1-205ENST00000483956 BLMP54132 1417 aaPredicted RBP15.1■□□□□ 0.01
SEC61A1-205ENST00000483956 ATP10BO94823 1461 aa15.1■□□□□ 0.01
SEC61A1-205ENST00000483956 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
SEC61A1-205ENST00000483956 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
SEC61A1-205ENST00000483956 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
SEC61A1-205ENST00000483956 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
SEC61A1-205ENST00000483956 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
SEC61A1-205ENST00000483956 UNC13BO14795 1591 aa15.08■□□□□ 0
SEC61A1-205ENST00000483956 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
SEC61A1-205ENST00000483956 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
SEC61A1-205ENST00000483956 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
SEC61A1-205ENST00000483956 POGKQ9P215 609 aa15.08■□□□□ 0
SEC61A1-205ENST00000483956 AAMPQ13685 434 aa15.07■□□□□ 0
SEC61A1-205ENST00000483956 PREX2Q70Z35 1606 aa15.07■□□□□ 0
SEC61A1-205ENST00000483956 EIF2AK4Q9P2K8 1649 aaKnown RBP15.07■□□□□ 0
SEC61A1-205ENST00000483956 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
SEC61A1-205ENST00000483956 SAMD9LQ8IVG5 1584 aa15.06■□□□□ 0
SEC61A1-205ENST00000483956 MAST1Q9Y2H9 1570 aa15.05■□□□□ 0
SEC61A1-205ENST00000483956 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
SEC61A1-205ENST00000483956 JPH4Q96JJ6 628 aa15.05■□□□□ -0
SEC61A1-205ENST00000483956 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
SEC61A1-205ENST00000483956 A2MP01023 1474 aa15.04■□□□□ -0
SEC61A1-205ENST00000483956 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
SEC61A1-205ENST00000483956 CLCN1P35523 988 aa15.03■□□□□ -0
SEC61A1-205ENST00000483956 PLA2R1Q13018 1463 aa15.03■□□□□ -0
SEC61A1-205ENST00000483956 FGD1P98174 961 aa15.02■□□□□ -0
SEC61A1-205ENST00000483956 RSPH4AQ5TD94 716 aa15.02■□□□□ -0
SEC61A1-205ENST00000483956 IQGAP3Q86VI3 1631 aa15.02■□□□□ -0
SEC61A1-205ENST00000483956 ARXQ96QS3 562 aa15.02□□□□□ -0.01
SEC61A1-205ENST00000483956 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
SEC61A1-205ENST00000483956 TESK2Q96S53 571 aa15.01□□□□□ -0.01
SEC61A1-205ENST00000483956 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
SEC61A1-205ENST00000483956 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms