RNA–Protein interactions for RNA: ENST00000483539.2

OBSCN-207, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 5

Gene OBSCN, Length 4,779 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-207ENST00000483539 USP47Q96K76 1375 aa16.83■□□□□ 0.29
OBSCN-207ENST00000483539 CCDC7Q96M83 1385 aa16.83■□□□□ 0.29
OBSCN-207ENST00000483539 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
OBSCN-207ENST00000483539 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
OBSCN-207ENST00000483539 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
OBSCN-207ENST00000483539 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
OBSCN-207ENST00000483539 NPHP1O15259 732 aa16.8■□□□□ 0.28
OBSCN-207ENST00000483539 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
OBSCN-207ENST00000483539 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
OBSCN-207ENST00000483539 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
OBSCN-207ENST00000483539 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
OBSCN-207ENST00000483539 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
OBSCN-207ENST00000483539 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
OBSCN-207ENST00000483539 MCCP23508 829 aa16.78■□□□□ 0.28
OBSCN-207ENST00000483539 SLKQ9H2G2 1235 aaPredicted RBP16.78■□□□□ 0.28
OBSCN-207ENST00000483539 GSE1Q14687 1217 aa16.78■□□□□ 0.28
OBSCN-207ENST00000483539 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
OBSCN-207ENST00000483539 ZRSR1Q15695 479 aaKnown RBP16.78■□□□□ 0.28
OBSCN-207ENST00000483539 NCOA2Q15596 1464 aa16.77■□□□□ 0.28
OBSCN-207ENST00000483539 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
OBSCN-207ENST00000483539 STK26Q9P289 416 aa16.77■□□□□ 0.27
OBSCN-207ENST00000483539 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
OBSCN-207ENST00000483539 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
OBSCN-207ENST00000483539 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
OBSCN-207ENST00000483539 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
OBSCN-207ENST00000483539 KIF7Q2M1P5 1343 aa16.73■□□□□ 0.27
OBSCN-207ENST00000483539 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
OBSCN-207ENST00000483539 RSPH6AQ9H0K4 717 aa16.73■□□□□ 0.27
OBSCN-207ENST00000483539 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
OBSCN-207ENST00000483539 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
OBSCN-207ENST00000483539 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
OBSCN-207ENST00000483539 CUL7Q14999 1698 aa16.72■□□□□ 0.27
OBSCN-207ENST00000483539 E9PSI1 815 aa16.72■□□□□ 0.27
OBSCN-207ENST00000483539 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
OBSCN-207ENST00000483539 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
OBSCN-207ENST00000483539 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
OBSCN-207ENST00000483539 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
OBSCN-207ENST00000483539 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
OBSCN-207ENST00000483539 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
OBSCN-207ENST00000483539 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
OBSCN-207ENST00000483539 SAFB2Q14151 953 aaKnown RBP eCLIP16.7■□□□□ 0.26
OBSCN-207ENST00000483539 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
OBSCN-207ENST00000483539 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
OBSCN-207ENST00000483539 PANK3Q9H999 370 aa16.7■□□□□ 0.26
OBSCN-207ENST00000483539 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
OBSCN-207ENST00000483539 NRDCO43847 1150 aa16.7■□□□□ 0.26
OBSCN-207ENST00000483539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.26
OBSCN-207ENST00000483539 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
OBSCN-207ENST00000483539 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
OBSCN-207ENST00000483539 VSIG10Q8N0Z9 540 aa16.68■□□□□ 0.26
OBSCN-207ENST00000483539 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
OBSCN-207ENST00000483539 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
OBSCN-207ENST00000483539 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
OBSCN-207ENST00000483539 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
OBSCN-207ENST00000483539 AAMPQ13685 434 aa16.67■□□□□ 0.26
OBSCN-207ENST00000483539 POGZQ7Z3K3 1410 aa16.66■□□□□ 0.26
OBSCN-207ENST00000483539 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
OBSCN-207ENST00000483539 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
OBSCN-207ENST00000483539 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
OBSCN-207ENST00000483539 HECW1Q76N89 1606 aa16.65■□□□□ 0.26
OBSCN-207ENST00000483539 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
OBSCN-207ENST00000483539 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
OBSCN-207ENST00000483539 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
OBSCN-207ENST00000483539 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
OBSCN-207ENST00000483539 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
OBSCN-207ENST00000483539 SOX12O15370 315 aa16.64■□□□□ 0.25
OBSCN-207ENST00000483539 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
OBSCN-207ENST00000483539 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
OBSCN-207ENST00000483539 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
OBSCN-207ENST00000483539 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
OBSCN-207ENST00000483539 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
OBSCN-207ENST00000483539 CCDC146Q8IYE0 955 aa16.63■□□□□ 0.25
OBSCN-207ENST00000483539 PLIN1O60240 522 aa16.62■□□□□ 0.25
OBSCN-207ENST00000483539 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
OBSCN-207ENST00000483539 KCNJ4P48050 445 aa16.61■□□□□ 0.25
OBSCN-207ENST00000483539 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
OBSCN-207ENST00000483539 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
OBSCN-207ENST00000483539 TERF2IPQ9NYB0 399 aa16.61■□□□□ 0.25
OBSCN-207ENST00000483539 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
OBSCN-207ENST00000483539 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
OBSCN-207ENST00000483539 CLUAP1Q96AJ1 413 aa16.59■□□□□ 0.25
OBSCN-207ENST00000483539 HMMRO75330 724 aa16.58■□□□□ 0.25
OBSCN-207ENST00000483539 HSP90AA2PQ14568 343 aaPredicted RBP16.58■□□□□ 0.25
OBSCN-207ENST00000483539 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.25
OBSCN-207ENST00000483539 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.24
OBSCN-207ENST00000483539 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
OBSCN-207ENST00000483539 ATF3P18847 181 aa16.57■□□□□ 0.24
OBSCN-207ENST00000483539 IQGAP2Q13576 1575 aa16.57■□□□□ 0.24
OBSCN-207ENST00000483539 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
OBSCN-207ENST00000483539 SUPT6HQ7KZ85 1726 aaKnown RBP16.57■□□□□ 0.24
OBSCN-207ENST00000483539 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
OBSCN-207ENST00000483539 FGD1P98174 961 aa16.57■□□□□ 0.24
OBSCN-207ENST00000483539 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
OBSCN-207ENST00000483539 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
OBSCN-207ENST00000483539 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
OBSCN-207ENST00000483539 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
OBSCN-207ENST00000483539 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
OBSCN-207ENST00000483539 ST18O60284 1047 aa16.56■□□□□ 0.24
OBSCN-207ENST00000483539 SLC4A3P48751 1232 aa16.55■□□□□ 0.24
OBSCN-207ENST00000483539 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms