RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
MSL3-215ENST00000482871 CHD1O14646 1710 aa12.71□□□□□ -0.37
MSL3-215ENST00000482871 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
MSL3-215ENST00000482871 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
MSL3-215ENST00000482871 KIF3CO14782 793 aa12.69□□□□□ -0.38
MSL3-215ENST00000482871 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
MSL3-215ENST00000482871 IGF1RP08069 1367 aa12.69□□□□□ -0.38
MSL3-215ENST00000482871 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
MSL3-215ENST00000482871 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
MSL3-215ENST00000482871 WDR70Q9NW82 654 aa12.68□□□□□ -0.38
MSL3-215ENST00000482871 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
MSL3-215ENST00000482871 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
MSL3-215ENST00000482871 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
MSL3-215ENST00000482871 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
MSL3-215ENST00000482871 CUL7Q14999 1698 aa12.65□□□□□ -0.38
MSL3-215ENST00000482871 DSG2Q14126 1118 aa12.65□□□□□ -0.38
MSL3-215ENST00000482871 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
MSL3-215ENST00000482871 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
MSL3-215ENST00000482871 FOXK1P85037 733 aa12.63□□□□□ -0.39
MSL3-215ENST00000482871 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
MSL3-215ENST00000482871 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
MSL3-215ENST00000482871 EEA1Q15075 1411 aa12.62□□□□□ -0.39
MSL3-215ENST00000482871 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
MSL3-215ENST00000482871 MFSD10Q14728 455 aa12.6□□□□□ -0.39
MSL3-215ENST00000482871 SNPHO15079 494 aa12.59□□□□□ -0.39
MSL3-215ENST00000482871 POTEMA6NI47 508 aa12.57□□□□□ -0.4
MSL3-215ENST00000482871 RAPGEF2Q9Y4G8 1499 aa12.56□□□□□ -0.4
MSL3-215ENST00000482871 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
MSL3-215ENST00000482871 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
MSL3-215ENST00000482871 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
MSL3-215ENST00000482871 NUP160Q12769 1436 aa12.54□□□□□ -0.4
MSL3-215ENST00000482871 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
MSL3-215ENST00000482871 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
MSL3-215ENST00000482871 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
MSL3-215ENST00000482871 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
MSL3-215ENST00000482871 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.41
MSL3-215ENST00000482871 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
MSL3-215ENST00000482871 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
MSL3-215ENST00000482871 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
MSL3-215ENST00000482871 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
MSL3-215ENST00000482871 E2F4Q16254 413 aa12.5□□□□□ -0.41
MSL3-215ENST00000482871 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
MSL3-215ENST00000482871 KIF21BO75037 1637 aa12.48□□□□□ -0.41
MSL3-215ENST00000482871 KIAA0586Q9BVV6 1533 aa12.47□□□□□ -0.41
MSL3-215ENST00000482871 JPH4Q96JJ6 628 aa12.47□□□□□ -0.41
MSL3-215ENST00000482871 CTTNBP2Q8WZ74 1663 aa12.47□□□□□ -0.41
MSL3-215ENST00000482871 SLC24A3Q9HC58 644 aa12.46□□□□□ -0.41
MSL3-215ENST00000482871 SLC34A2O95436 690 aa12.45□□□□□ -0.42
MSL3-215ENST00000482871 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
MSL3-215ENST00000482871 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
MSL3-215ENST00000482871 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
MSL3-215ENST00000482871 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
MSL3-215ENST00000482871 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
MSL3-215ENST00000482871 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
MSL3-215ENST00000482871 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 TBC1D12O60347 775 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 PCDHGA4Q9Y5G9 962 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 SHROOM2Q13796 1616 aa12.43□□□□□ -0.42
MSL3-215ENST00000482871 ST18O60284 1047 aa12.42□□□□□ -0.42
MSL3-215ENST00000482871 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
MSL3-215ENST00000482871 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
MSL3-215ENST00000482871 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
MSL3-215ENST00000482871 GOLGA3Q08378 1498 aa12.41□□□□□ -0.42
MSL3-215ENST00000482871 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
MSL3-215ENST00000482871 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.42
MSL3-215ENST00000482871 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
MSL3-215ENST00000482871 DPYSL4O14531 572 aa12.4□□□□□ -0.42
MSL3-215ENST00000482871 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
MSL3-215ENST00000482871 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
MSL3-215ENST00000482871 SEMA3EO15041 775 aa12.37□□□□□ -0.43
MSL3-215ENST00000482871 NUDT7P0C024 238 aa12.37□□□□□ -0.43
MSL3-215ENST00000482871 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
MSL3-215ENST00000482871 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
MSL3-215ENST00000482871 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
MSL3-215ENST00000482871 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
MSL3-215ENST00000482871 ZMYND10O75800 440 aa12.35□□□□□ -0.43
MSL3-215ENST00000482871 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
MSL3-215ENST00000482871 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
MSL3-215ENST00000482871 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
MSL3-215ENST00000482871 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
MSL3-215ENST00000482871 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
MSL3-215ENST00000482871 EVI5O60447 810 aa12.33□□□□□ -0.44
MSL3-215ENST00000482871 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
MSL3-215ENST00000482871 EMP3P54852 163 aa12.32□□□□□ -0.44
MSL3-215ENST00000482871 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
MSL3-215ENST00000482871 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
MSL3-215ENST00000482871 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
MSL3-215ENST00000482871 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
MSL3-215ENST00000482871 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
MSL3-215ENST00000482871 PTPRGP23470 1445 aa12.29□□□□□ -0.44
MSL3-215ENST00000482871 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
MSL3-215ENST00000482871 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
MSL3-215ENST00000482871 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
MSL3-215ENST00000482871 ERBB3P21860 1342 aa12.27□□□□□ -0.45
MSL3-215ENST00000482871 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
MSL3-215ENST00000482871 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
MSL3-215ENST00000482871 PDIA6Q15084 440 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms