RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CLCN1P35523 988 aa13.83□□□□□ -0.2
SIK3-210ENST00000480468 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
SIK3-210ENST00000480468 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
SIK3-210ENST00000480468 POGKQ9P215 609 aa13.83□□□□□ -0.2
SIK3-210ENST00000480468 EPRSP07814 1512 aaKnown RBP13.82□□□□□ -0.2
SIK3-210ENST00000480468 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
SIK3-210ENST00000480468 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
SIK3-210ENST00000480468 PNNQ9H307 717 aaKnown RBP13.81□□□□□ -0.2
SIK3-210ENST00000480468 HSP90AA1P07900 732 aaKnown RBP13.8□□□□□ -0.2
SIK3-210ENST00000480468 BECN1Q14457 450 aa13.79□□□□□ -0.2
SIK3-210ENST00000480468 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
SIK3-210ENST00000480468 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
SIK3-210ENST00000480468 CARD11Q9BXL7 1154 aa13.78□□□□□ -0.2
SIK3-210ENST00000480468 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
SIK3-210ENST00000480468 C20orf194Q5TEA3 1177 aa13.78□□□□□ -0.2
SIK3-210ENST00000480468 USP19O94966 1318 aa13.77□□□□□ -0.2
SIK3-210ENST00000480468 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.21
SIK3-210ENST00000480468 NAP1L5Q96NT1 182 aaPredicted RBP13.77□□□□□ -0.21
SIK3-210ENST00000480468 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
SIK3-210ENST00000480468 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
SIK3-210ENST00000480468 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
SIK3-210ENST00000480468 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
SIK3-210ENST00000480468 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
SIK3-210ENST00000480468 ANTXR1Q9H6X2 564 aa13.75□□□□□ -0.21
SIK3-210ENST00000480468 GOLGA6L3A6NEY3 463 aa13.74□□□□□ -0.21
SIK3-210ENST00000480468 PER1O15534 1290 aaPredicted RBP13.74□□□□□ -0.21
SIK3-210ENST00000480468 XRCC6P12956 609 aaKnown RBP eCLIP13.74□□□□□ -0.21
SIK3-210ENST00000480468 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
SIK3-210ENST00000480468 WDR62O43379 1518 aa13.74□□□□□ -0.21
SIK3-210ENST00000480468 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
SIK3-210ENST00000480468 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
SIK3-210ENST00000480468 NLRP1Q9C000 1473 aa13.72□□□□□ -0.21
SIK3-210ENST00000480468 DUSP27Q5VZP5 1158 aa13.71□□□□□ -0.21
SIK3-210ENST00000480468 ZMYM3Q14202 1370 aa13.71□□□□□ -0.21
SIK3-210ENST00000480468 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.22
SIK3-210ENST00000480468 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.22
SIK3-210ENST00000480468 RGS3P49796 1198 aa13.71□□□□□ -0.22
SIK3-210ENST00000480468 ISY1Q9ULR0 285 aaKnown RBP13.71□□□□□ -0.22
SIK3-210ENST00000480468 PKD2Q13563 968 aa13.7□□□□□ -0.22
SIK3-210ENST00000480468 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
SIK3-210ENST00000480468 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
SIK3-210ENST00000480468 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
SIK3-210ENST00000480468 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
SIK3-210ENST00000480468 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
SIK3-210ENST00000480468 MRE11P49959 708 aa13.68□□□□□ -0.22
SIK3-210ENST00000480468 COL17A1Q9UMD9 1497 aaPredicted RBP13.68□□□□□ -0.22
SIK3-210ENST00000480468 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
SIK3-210ENST00000480468 TPM2P07951 284 aa13.67□□□□□ -0.22
SIK3-210ENST00000480468 CROCC2H7BZ55 1655 aa13.67□□□□□ -0.22
SIK3-210ENST00000480468 LAMC1P11047 1609 aa13.66□□□□□ -0.22
SIK3-210ENST00000480468 SLKQ9H2G2 1235 aaPredicted RBP13.66□□□□□ -0.22
SIK3-210ENST00000480468 MCM4P33991 863 aa13.66□□□□□ -0.22
SIK3-210ENST00000480468 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
SIK3-210ENST00000480468 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
SIK3-210ENST00000480468 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
SIK3-210ENST00000480468 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 ESPNB1AK53 854 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
SIK3-210ENST00000480468 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
SIK3-210ENST00000480468 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
SIK3-210ENST00000480468 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
SIK3-210ENST00000480468 ANKRD30AQ9BXX3 1397 aa13.63□□□□□ -0.23
SIK3-210ENST00000480468 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
SIK3-210ENST00000480468 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
SIK3-210ENST00000480468 SEC24BO95487 1268 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
SIK3-210ENST00000480468 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
SIK3-210ENST00000480468 TBC1D2Q9BYX2 928 aa13.61□□□□□ -0.23
SIK3-210ENST00000480468 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
SIK3-210ENST00000480468 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
SIK3-210ENST00000480468 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
SIK3-210ENST00000480468 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
SIK3-210ENST00000480468 AAMPQ13685 434 aa13.6□□□□□ -0.23
SIK3-210ENST00000480468 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
SIK3-210ENST00000480468 TRAK2O60296 914 aa13.59□□□□□ -0.23
SIK3-210ENST00000480468 IGHDP01880 384 aa13.59□□□□□ -0.23
SIK3-210ENST00000480468 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
SIK3-210ENST00000480468 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
SIK3-210ENST00000480468 CHMP5Q9NZZ3 219 aa13.59□□□□□ -0.23
SIK3-210ENST00000480468 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
SIK3-210ENST00000480468 PTPRGP23470 1445 aa13.59□□□□□ -0.23
SIK3-210ENST00000480468 SHANK2Q9UPX8 1470 aa13.58□□□□□ -0.24
SIK3-210ENST00000480468 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
SIK3-210ENST00000480468 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
SIK3-210ENST00000480468 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIK3-210ENST00000480468 PANK3Q9H999 370 aa13.57□□□□□ -0.24
SIK3-210ENST00000480468 PLXNC1O60486 1568 aa13.57□□□□□ -0.24
SIK3-210ENST00000480468 NUP155O75694 1391 aa13.57□□□□□ -0.24
SIK3-210ENST00000480468 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 TESK2Q96S53 571 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 ABCC2Q92887 1545 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 TERF1P54274 439 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms