RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
NOTCH2-203ENST00000479412 PLEKHH2Q8IVE3 1493 aa18.72■□□□□ 0.59
NOTCH2-203ENST00000479412 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
NOTCH2-203ENST00000479412 KIF3BO15066 747 aa18.72■□□□□ 0.59
NOTCH2-203ENST00000479412 ARHGEF12Q9NZN5 1544 aa18.72■□□□□ 0.59
NOTCH2-203ENST00000479412 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
NOTCH2-203ENST00000479412 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
NOTCH2-203ENST00000479412 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
NOTCH2-203ENST00000479412 KIAA1107Q9UPP5 1409 aa18.7■□□□□ 0.58
NOTCH2-203ENST00000479412 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
NOTCH2-203ENST00000479412 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
NOTCH2-203ENST00000479412 KDM5BQ9UGL1 1544 aa18.69■□□□□ 0.58
NOTCH2-203ENST00000479412 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
NOTCH2-203ENST00000479412 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
NOTCH2-203ENST00000479412 FAM9BQ8IZU0 186 aa18.68■□□□□ 0.58
NOTCH2-203ENST00000479412 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
NOTCH2-203ENST00000479412 RAPGEF3O95398 923 aa18.67■□□□□ 0.58
NOTCH2-203ENST00000479412 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
NOTCH2-203ENST00000479412 GGT6Q6P531 493 aa18.67■□□□□ 0.58
NOTCH2-203ENST00000479412 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
NOTCH2-203ENST00000479412 NEFMP07197 916 aa18.65■□□□□ 0.58
NOTCH2-203ENST00000479412 ASXL2Q76L83 1435 aa18.65■□□□□ 0.58
NOTCH2-203ENST00000479412 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
NOTCH2-203ENST00000479412 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.57
NOTCH2-203ENST00000479412 PLCH2O75038 1416 aa18.64■□□□□ 0.57
NOTCH2-203ENST00000479412 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
NOTCH2-203ENST00000479412 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
NOTCH2-203ENST00000479412 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
NOTCH2-203ENST00000479412 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
NOTCH2-203ENST00000479412 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
NOTCH2-203ENST00000479412 TEX14Q8IWB6 1497 aa18.6■□□□□ 0.57
NOTCH2-203ENST00000479412 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
NOTCH2-203ENST00000479412 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
NOTCH2-203ENST00000479412 FANCAO15360 1455 aa18.59■□□□□ 0.57
NOTCH2-203ENST00000479412 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
NOTCH2-203ENST00000479412 CCDC144AA2RUR9 1427 aa18.59■□□□□ 0.57
NOTCH2-203ENST00000479412 ADGBQ8N7X0 1667 aa18.58■□□□□ 0.57
NOTCH2-203ENST00000479412 USP47Q96K76 1375 aa18.58■□□□□ 0.57
NOTCH2-203ENST00000479412 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
NOTCH2-203ENST00000479412 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
NOTCH2-203ENST00000479412 FAM135AQ9P2D6 1515 aa18.55■□□□□ 0.56
NOTCH2-203ENST00000479412 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
NOTCH2-203ENST00000479412 ADGRL1O94910 1474 aa18.54■□□□□ 0.56
NOTCH2-203ENST00000479412 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
NOTCH2-203ENST00000479412 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
NOTCH2-203ENST00000479412 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
NOTCH2-203ENST00000479412 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
NOTCH2-203ENST00000479412 MLECQ14165 292 aa18.49■□□□□ 0.55
NOTCH2-203ENST00000479412 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
NOTCH2-203ENST00000479412 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
NOTCH2-203ENST00000479412 UHRF1BP1LA0JNW5 1464 aa18.48■□□□□ 0.55
NOTCH2-203ENST00000479412 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
NOTCH2-203ENST00000479412 PKNOX2Q96KN3 472 aa18.48■□□□□ 0.55
NOTCH2-203ENST00000479412 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
NOTCH2-203ENST00000479412 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
NOTCH2-203ENST00000479412 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
NOTCH2-203ENST00000479412 ABCC1P33527 1531 aa18.44■□□□□ 0.54
NOTCH2-203ENST00000479412 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
NOTCH2-203ENST00000479412 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
NOTCH2-203ENST00000479412 CNTLNQ9NXG0 1405 aa18.39■□□□□ 0.54
NOTCH2-203ENST00000479412 DUOX2Q9NRD8 1548 aa18.38■□□□□ 0.53
NOTCH2-203ENST00000479412 SPATA31E1Q6ZUB1 1445 aa18.38■□□□□ 0.53
NOTCH2-203ENST00000479412 KANK1Q14678 1352 aa18.37■□□□□ 0.53
NOTCH2-203ENST00000479412 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
NOTCH2-203ENST00000479412 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
NOTCH2-203ENST00000479412 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
NOTCH2-203ENST00000479412 SLC4A3P48751 1232 aa18.36■□□□□ 0.53
NOTCH2-203ENST00000479412 A2MP01023 1474 aa18.34■□□□□ 0.53
NOTCH2-203ENST00000479412 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
NOTCH2-203ENST00000479412 ZFYVE16Q7Z3T8 1539 aa18.33■□□□□ 0.53
NOTCH2-203ENST00000479412 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.53
NOTCH2-203ENST00000479412 ERBINQ96RT1 1412 aa18.33■□□□□ 0.52
NOTCH2-203ENST00000479412 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
NOTCH2-203ENST00000479412 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
NOTCH2-203ENST00000479412 ADGRF5Q8IZF2 1346 aa18.31■□□□□ 0.52
NOTCH2-203ENST00000479412 GSE1Q14687 1217 aa18.31■□□□□ 0.52
NOTCH2-203ENST00000479412 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
NOTCH2-203ENST00000479412 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
NOTCH2-203ENST00000479412 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
NOTCH2-203ENST00000479412 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
NOTCH2-203ENST00000479412 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
NOTCH2-203ENST00000479412 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
NOTCH2-203ENST00000479412 PANK3Q9H999 370 aa18.28■□□□□ 0.52
NOTCH2-203ENST00000479412 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
NOTCH2-203ENST00000479412 KDM5DQ9BY66 1539 aa18.27■□□□□ 0.52
NOTCH2-203ENST00000479412 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
NOTCH2-203ENST00000479412 ARXQ96QS3 562 aa18.27■□□□□ 0.52
NOTCH2-203ENST00000479412 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.51
NOTCH2-203ENST00000479412 STK26Q9P289 416 aa18.26■□□□□ 0.51
NOTCH2-203ENST00000479412 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
NOTCH2-203ENST00000479412 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
NOTCH2-203ENST00000479412 ABCA9Q8IUA7 1624 aa18.26■□□□□ 0.51
NOTCH2-203ENST00000479412 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
NOTCH2-203ENST00000479412 MAST1Q9Y2H9 1570 aa18.25■□□□□ 0.51
NOTCH2-203ENST00000479412 ATP10AO60312 1499 aa18.25■□□□□ 0.51
NOTCH2-203ENST00000479412 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
NOTCH2-203ENST00000479412 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
NOTCH2-203ENST00000479412 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
NOTCH2-203ENST00000479412 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
NOTCH2-203ENST00000479412 PDE4AP27815 886 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms