RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
KCNIP3-206ENST00000475491 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
KCNIP3-206ENST00000475491 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
KCNIP3-206ENST00000475491 TIMELESSQ9UNS1 1208 aa15.86■□□□□ 0.13
KCNIP3-206ENST00000475491 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
KCNIP3-206ENST00000475491 GCC2Q8IWJ2 1684 aa15.85■□□□□ 0.13
KCNIP3-206ENST00000475491 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
KCNIP3-206ENST00000475491 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
KCNIP3-206ENST00000475491 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
KCNIP3-206ENST00000475491 MYO5CQ9NQX4 1742 aa15.83■□□□□ 0.13
KCNIP3-206ENST00000475491 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
KCNIP3-206ENST00000475491 CCDC184Q52MB2 194 aa15.81■□□□□ 0.12
KCNIP3-206ENST00000475491 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
KCNIP3-206ENST00000475491 FBXO31Q5XUX0 539 aaPredicted RBP15.8■□□□□ 0.12
KCNIP3-206ENST00000475491 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
KCNIP3-206ENST00000475491 ADGRL2O95490 1459 aa15.8■□□□□ 0.12
KCNIP3-206ENST00000475491 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
KCNIP3-206ENST00000475491 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
KCNIP3-206ENST00000475491 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
KCNIP3-206ENST00000475491 TMEM132EQ6IEE7 984 aa15.77■□□□□ 0.12
KCNIP3-206ENST00000475491 USP47Q96K76 1375 aa15.77■□□□□ 0.12
KCNIP3-206ENST00000475491 STAG3Q9UJ98 1225 aa15.77■□□□□ 0.11
KCNIP3-206ENST00000475491 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
KCNIP3-206ENST00000475491 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
KCNIP3-206ENST00000475491 STK26Q9P289 416 aa15.75■□□□□ 0.11
KCNIP3-206ENST00000475491 KANK1Q14678 1352 aa15.75■□□□□ 0.11
KCNIP3-206ENST00000475491 YEATS2Q9ULM3 1422 aa15.75■□□□□ 0.11
KCNIP3-206ENST00000475491 ABCC1P33527 1531 aa15.74■□□□□ 0.11
KCNIP3-206ENST00000475491 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
KCNIP3-206ENST00000475491 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
KCNIP3-206ENST00000475491 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
KCNIP3-206ENST00000475491 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
KCNIP3-206ENST00000475491 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
KCNIP3-206ENST00000475491 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
KCNIP3-206ENST00000475491 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
KCNIP3-206ENST00000475491 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
KCNIP3-206ENST00000475491 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
KCNIP3-206ENST00000475491 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
KCNIP3-206ENST00000475491 UGGT1Q9NYU2 1555 aa15.72■□□□□ 0.11
KCNIP3-206ENST00000475491 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
KCNIP3-206ENST00000475491 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
KCNIP3-206ENST00000475491 ARHGEF5Q12774 1597 aa15.71■□□□□ 0.1
KCNIP3-206ENST00000475491 DHX29Q7Z478 1369 aaKnown RBP15.7■□□□□ 0.1
KCNIP3-206ENST00000475491 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
KCNIP3-206ENST00000475491 ADGRF5Q8IZF2 1346 aa15.7■□□□□ 0.1
KCNIP3-206ENST00000475491 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
KCNIP3-206ENST00000475491 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
KCNIP3-206ENST00000475491 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
KCNIP3-206ENST00000475491 FKBP8Q14318 412 aa15.67■□□□□ 0.1
KCNIP3-206ENST00000475491 DUOX2Q9NRD8 1548 aa15.67■□□□□ 0.1
KCNIP3-206ENST00000475491 CCDC7Q96M83 1385 aa15.67■□□□□ 0.1
KCNIP3-206ENST00000475491 A2MP01023 1474 aa15.67■□□□□ 0.1
KCNIP3-206ENST00000475491 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
KCNIP3-206ENST00000475491 IDI1Q13907 227 aa15.64■□□□□ 0.09
KCNIP3-206ENST00000475491 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
KCNIP3-206ENST00000475491 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
KCNIP3-206ENST00000475491 TMC1Q8TDI8 760 aa15.63■□□□□ 0.09
KCNIP3-206ENST00000475491 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
KCNIP3-206ENST00000475491 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
KCNIP3-206ENST00000475491 POGZQ7Z3K3 1410 aa15.62■□□□□ 0.09
KCNIP3-206ENST00000475491 ERBINQ96RT1 1412 aa15.61■□□□□ 0.09
KCNIP3-206ENST00000475491 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.09
KCNIP3-206ENST00000475491 NUTM2FA1L443 756 aa15.58■□□□□ 0.08
KCNIP3-206ENST00000475491 COL17A1Q9UMD9 1497 aaPredicted RBP15.58■□□□□ 0.08
KCNIP3-206ENST00000475491 PANK3Q9H999 370 aa15.58■□□□□ 0.08
KCNIP3-206ENST00000475491 RTEL1-TNFRSF6BF6WH68 1400 aa15.56■□□□□ 0.08
KCNIP3-206ENST00000475491 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
KCNIP3-206ENST00000475491 NEFLP07196 543 aa15.56■□□□□ 0.08
KCNIP3-206ENST00000475491 ATP10AO60312 1499 aa15.56■□□□□ 0.08
KCNIP3-206ENST00000475491 DISP3Q9P2K9 1392 aa15.54■□□□□ 0.08
KCNIP3-206ENST00000475491 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
KCNIP3-206ENST00000475491 KIDINS220Q9ULH0 1771 aa15.54■□□□□ 0.08
KCNIP3-206ENST00000475491 NPATQ14207 1427 aa15.53■□□□□ 0.08
KCNIP3-206ENST00000475491 NOS1P29475 1434 aa15.53■□□□□ 0.08
KCNIP3-206ENST00000475491 MAST1Q9Y2H9 1570 aa15.52■□□□□ 0.07
KCNIP3-206ENST00000475491 TMF1P82094 1093 aa15.52■□□□□ 0.07
KCNIP3-206ENST00000475491 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
KCNIP3-206ENST00000475491 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
KCNIP3-206ENST00000475491 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
KCNIP3-206ENST00000475491 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
KCNIP3-206ENST00000475491 TESK2Q96S53 571 aa15.49■□□□□ 0.07
KCNIP3-206ENST00000475491 CNTLNQ9NXG0 1405 aa15.49■□□□□ 0.07
KCNIP3-206ENST00000475491 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
KCNIP3-206ENST00000475491 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
KCNIP3-206ENST00000475491 E9PCH4 1651 aa15.48■□□□□ 0.07
KCNIP3-206ENST00000475491 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
KCNIP3-206ENST00000475491 SLC12A5Q9H2X9 1139 aa15.47■□□□□ 0.07
KCNIP3-206ENST00000475491 POGKQ9P215 609 aa15.46■□□□□ 0.07
KCNIP3-206ENST00000475491 ABCA6Q8N139 1617 aa15.46■□□□□ 0.07
KCNIP3-206ENST00000475491 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.07
KCNIP3-206ENST00000475491 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.07
KCNIP3-206ENST00000475491 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.06
KCNIP3-206ENST00000475491 KDM5DQ9BY66 1539 aa15.45■□□□□ 0.06
KCNIP3-206ENST00000475491 UNC13BO14795 1591 aa15.45■□□□□ 0.06
KCNIP3-206ENST00000475491 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
KCNIP3-206ENST00000475491 CEP152O94986 1710 aa15.45■□□□□ 0.06
KCNIP3-206ENST00000475491 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
KCNIP3-206ENST00000475491 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 NEO1Q92859 1461 aa15.44■□□□□ 0.06
KCNIP3-206ENST00000475491 KNSTRNQ9Y448 316 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms