RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
SSPO-205ENST00000475488 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
SSPO-205ENST00000475488 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
SSPO-205ENST00000475488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSPO-205ENST00000475488 C1orf141Q5JVX7 400 aa17.67■□□□□ 0.42
SSPO-205ENST00000475488 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
SSPO-205ENST00000475488 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
SSPO-205ENST00000475488 PCMTD1Q96MG8 357 aaPredicted RBP17.66■□□□□ 0.42
SSPO-205ENST00000475488 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
SSPO-205ENST00000475488 TPM1P09493 284 aa17.66■□□□□ 0.42
SSPO-205ENST00000475488 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
SSPO-205ENST00000475488 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
SSPO-205ENST00000475488 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
SSPO-205ENST00000475488 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
SSPO-205ENST00000475488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSPO-205ENST00000475488 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SSPO-205ENST00000475488 DHX16O60231 1041 aaKnown RBP17.63■□□□□ 0.41
SSPO-205ENST00000475488 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
SSPO-205ENST00000475488 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
SSPO-205ENST00000475488 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
SSPO-205ENST00000475488 CCAR2Q8N163 923 aaKnown RBP17.62■□□□□ 0.41
SSPO-205ENST00000475488 SYTL4Q96C24 671 aaPredicted RBP17.62■□□□□ 0.41
SSPO-205ENST00000475488 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
SSPO-205ENST00000475488 EEA1Q15075 1411 aa17.62■□□□□ 0.41
SSPO-205ENST00000475488 FOXD4L5Q5VV16 416 aaPredicted RBP17.61■□□□□ 0.41
SSPO-205ENST00000475488 FOXD4L4Q8WXT5 416 aaPredicted RBP17.61■□□□□ 0.41
SSPO-205ENST00000475488 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
SSPO-205ENST00000475488 NGEFQ8N5V2 710 aa17.61■□□□□ 0.41
SSPO-205ENST00000475488 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
SSPO-205ENST00000475488 ST18O60284 1047 aa17.6■□□□□ 0.41
SSPO-205ENST00000475488 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
SSPO-205ENST00000475488 GOLGA6L19H0YKK7 550 aa17.59■□□□□ 0.41
SSPO-205ENST00000475488 TRIM29Q14134 588 aa17.59■□□□□ 0.41
SSPO-205ENST00000475488 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
SSPO-205ENST00000475488 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
SSPO-205ENST00000475488 CCDC47Q96A33 483 aaKnown RBP17.59■□□□□ 0.41
SSPO-205ENST00000475488 ODF2Q5BJF6 829 aa17.57■□□□□ 0.4
SSPO-205ENST00000475488 MCTP1Q6DN14 999 aa17.57■□□□□ 0.4
SSPO-205ENST00000475488 APPP05067 770 aa17.57■□□□□ 0.4
SSPO-205ENST00000475488 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
SSPO-205ENST00000475488 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
SSPO-205ENST00000475488 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
SSPO-205ENST00000475488 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
SSPO-205ENST00000475488 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
SSPO-205ENST00000475488 R3HCC1Q9Y3T6 440 aaKnown RBP17.56■□□□□ 0.4
SSPO-205ENST00000475488 PKD2Q13563 968 aa17.55■□□□□ 0.4
SSPO-205ENST00000475488 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
SSPO-205ENST00000475488 RRP12Q5JTH9 1297 aaKnown RBP17.54■□□□□ 0.4
SSPO-205ENST00000475488 CCDC146Q8IYE0 955 aa17.54■□□□□ 0.4
SSPO-205ENST00000475488 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
SSPO-205ENST00000475488 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
SSPO-205ENST00000475488 CT47A1Q5JQC4 288 aaPredicted RBP17.53■□□□□ 0.4
SSPO-205ENST00000475488 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSPO-205ENST00000475488 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
SSPO-205ENST00000475488 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
SSPO-205ENST00000475488 DEKP35659 375 aaKnown RBP17.52■□□□□ 0.39
SSPO-205ENST00000475488 ANKRD20A12PQ8NF67 263 aa17.52■□□□□ 0.39
SSPO-205ENST00000475488 NEXNQ0ZGT2 675 aa17.52■□□□□ 0.39
SSPO-205ENST00000475488 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
SSPO-205ENST00000475488 FOXD1Q16676 465 aa17.51■□□□□ 0.39
SSPO-205ENST00000475488 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
SSPO-205ENST00000475488 ERICH2A1L162 156 aa17.51■□□□□ 0.39
SSPO-205ENST00000475488 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
SSPO-205ENST00000475488 BECN2A8MW95 431 aa17.5■□□□□ 0.39
SSPO-205ENST00000475488 GPS2Q13227 327 aa17.5■□□□□ 0.39
SSPO-205ENST00000475488 HOOK1Q9UJC3 728 aaKnown RBP17.5■□□□□ 0.39
SSPO-205ENST00000475488 KIF3BO15066 747 aa17.5■□□□□ 0.39
SSPO-205ENST00000475488 PAF1Q8N7H5 531 aa17.49■□□□□ 0.39
SSPO-205ENST00000475488 RALBP1Q15311 655 aa17.49■□□□□ 0.39
SSPO-205ENST00000475488 TMEM132AQ24JP5 1023 aa17.49■□□□□ 0.39
SSPO-205ENST00000475488 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
SSPO-205ENST00000475488 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
SSPO-205ENST00000475488 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
SSPO-205ENST00000475488 TEFQ10587 303 aa17.48■□□□□ 0.39
SSPO-205ENST00000475488 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
SSPO-205ENST00000475488 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
SSPO-205ENST00000475488 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
SSPO-205ENST00000475488 EPS15P42566 896 aa17.47■□□□□ 0.39
SSPO-205ENST00000475488 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
SSPO-205ENST00000475488 EFCAB2Q5VUJ9 269 aa17.47■□□□□ 0.39
SSPO-205ENST00000475488 NAP1L1P55209 391 aaKnown RBP17.46■□□□□ 0.39
SSPO-205ENST00000475488 TRDNQ13061 729 aa17.46■□□□□ 0.39
SSPO-205ENST00000475488 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.38
SSPO-205ENST00000475488 DIAPH3Q9NSV4 1193 aa17.45■□□□□ 0.38
SSPO-205ENST00000475488 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
SSPO-205ENST00000475488 NUP155O75694 1391 aa17.44■□□□□ 0.38
SSPO-205ENST00000475488 PSME1Q06323 249 aa17.44■□□□□ 0.38
SSPO-205ENST00000475488 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
SSPO-205ENST00000475488 FYB1O15117 783 aa17.44■□□□□ 0.38
SSPO-205ENST00000475488 COG3Q96JB2 828 aa17.44■□□□□ 0.38
SSPO-205ENST00000475488 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
SSPO-205ENST00000475488 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
SSPO-205ENST00000475488 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
SSPO-205ENST00000475488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
SSPO-205ENST00000475488 CPLX1O14810 134 aa17.43■□□□□ 0.38
SSPO-205ENST00000475488 CUX2O14529 1486 aa17.42■□□□□ 0.38
SSPO-205ENST00000475488 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
SSPO-205ENST00000475488 ANKRD45Q5TZF3 282 aa17.42■□□□□ 0.38
SSPO-205ENST00000475488 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
SSPO-205ENST00000475488 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms