RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
RPGR-206ENST00000474584 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
RPGR-206ENST00000474584 BRD4O60885 1362 aaPredicted RBP18.98■□□□□ 0.63
RPGR-206ENST00000474584 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
RPGR-206ENST00000474584 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
RPGR-206ENST00000474584 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
RPGR-206ENST00000474584 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
RPGR-206ENST00000474584 RALBP1Q15311 655 aa18.97■□□□□ 0.63
RPGR-206ENST00000474584 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
RPGR-206ENST00000474584 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.63
RPGR-206ENST00000474584 LRPPRCP42704 1394 aaKnown RBP18.96■□□□□ 0.63
RPGR-206ENST00000474584 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
RPGR-206ENST00000474584 CCDC144AA2RUR9 1427 aa18.93■□□□□ 0.62
RPGR-206ENST00000474584 RSPH4AQ5TD94 716 aa18.93■□□□□ 0.62
RPGR-206ENST00000474584 UNC13BO14795 1591 aa18.92■□□□□ 0.62
RPGR-206ENST00000474584 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
RPGR-206ENST00000474584 MAST1Q9Y2H9 1570 aa18.91■□□□□ 0.62
RPGR-206ENST00000474584 LAMC1P11047 1609 aa18.9■□□□□ 0.62
RPGR-206ENST00000474584 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
RPGR-206ENST00000474584 MYO5CQ9NQX4 1742 aa18.89■□□□□ 0.61
RPGR-206ENST00000474584 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 EIF2AK4Q9P2K8 1649 aaKnown RBP18.86■□□□□ 0.61
RPGR-206ENST00000474584 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 PLXNC1O60486 1568 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 ARHGAP5Q13017 1502 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
RPGR-206ENST00000474584 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
RPGR-206ENST00000474584 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
RPGR-206ENST00000474584 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
RPGR-206ENST00000474584 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
RPGR-206ENST00000474584 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
RPGR-206ENST00000474584 A2MP01023 1474 aa18.83■□□□□ 0.61
RPGR-206ENST00000474584 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
RPGR-206ENST00000474584 RRP1P56182 461 aaKnown RBP18.81■□□□□ 0.6
RPGR-206ENST00000474584 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
RPGR-206ENST00000474584 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
RPGR-206ENST00000474584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.8■□□□□ 0.6
RPGR-206ENST00000474584 PDE3BQ13370 1112 aa18.8■□□□□ 0.6
RPGR-206ENST00000474584 RGL3Q3MIN7 710 aa18.8■□□□□ 0.6
RPGR-206ENST00000474584 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
RPGR-206ENST00000474584 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
RPGR-206ENST00000474584 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
RPGR-206ENST00000474584 CHD1O14646 1710 aa18.79■□□□□ 0.6
RPGR-206ENST00000474584 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
RPGR-206ENST00000474584 ZMYM4Q5VZL5 1548 aa18.78■□□□□ 0.6
RPGR-206ENST00000474584 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
RPGR-206ENST00000474584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
RPGR-206ENST00000474584 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
RPGR-206ENST00000474584 INSRP06213 1382 aa18.76■□□□□ 0.59
RPGR-206ENST00000474584 ATP10AO60312 1499 aa18.76■□□□□ 0.59
RPGR-206ENST00000474584 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
RPGR-206ENST00000474584 SHROOM2Q13796 1616 aa18.75■□□□□ 0.59
RPGR-206ENST00000474584 RNF17Q9BXT8 1623 aaKnown RBP18.75■□□□□ 0.59
RPGR-206ENST00000474584 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
RPGR-206ENST00000474584 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
RPGR-206ENST00000474584 TESK2Q96S53 571 aa18.73■□□□□ 0.59
RPGR-206ENST00000474584 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
RPGR-206ENST00000474584 ABCC2Q92887 1545 aa18.73■□□□□ 0.59
RPGR-206ENST00000474584 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
RPGR-206ENST00000474584 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
RPGR-206ENST00000474584 TMF1P82094 1093 aa18.72■□□□□ 0.59
RPGR-206ENST00000474584 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
RPGR-206ENST00000474584 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
RPGR-206ENST00000474584 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
RPGR-206ENST00000474584 PANK3Q9H999 370 aa18.69■□□□□ 0.58
RPGR-206ENST00000474584 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
RPGR-206ENST00000474584 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
RPGR-206ENST00000474584 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
RPGR-206ENST00000474584 MADDQ8WXG6 1647 aa18.65■□□□□ 0.58
RPGR-206ENST00000474584 CDCA7LQ96GN5 454 aa18.65■□□□□ 0.58
RPGR-206ENST00000474584 ABCC1P33527 1531 aa18.64■□□□□ 0.58
RPGR-206ENST00000474584 PLCH2O75038 1416 aa18.63■□□□□ 0.57
RPGR-206ENST00000474584 CEP152O94986 1710 aa18.63■□□□□ 0.57
RPGR-206ENST00000474584 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
RPGR-206ENST00000474584 NBR1Q14596 966 aa18.63■□□□□ 0.57
RPGR-206ENST00000474584 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
RPGR-206ENST00000474584 DEKP35659 375 aaKnown RBP18.61■□□□□ 0.57
RPGR-206ENST00000474584 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
RPGR-206ENST00000474584 MS4A1P11836 297 aa18.61■□□□□ 0.57
RPGR-206ENST00000474584 SYNMO15061 1565 aa18.61■□□□□ 0.57
RPGR-206ENST00000474584 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
RPGR-206ENST00000474584 TRPM2O94759 1503 aa18.6■□□□□ 0.57
RPGR-206ENST00000474584 EFCAB2Q5VUJ9 269 aa18.6■□□□□ 0.57
RPGR-206ENST00000474584 KNSTRNQ9Y448 316 aa18.58■□□□□ 0.56
RPGR-206ENST00000474584 CDCA8Q53HL2 280 aa18.57■□□□□ 0.56
RPGR-206ENST00000474584 PDE4AP27815 886 aa18.57■□□□□ 0.56
RPGR-206ENST00000474584 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
RPGR-206ENST00000474584 SCAF11Q99590 1463 aaKnown RBP18.55■□□□□ 0.56
RPGR-206ENST00000474584 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
RPGR-206ENST00000474584 PLIN1O60240 522 aa18.55■□□□□ 0.56
RPGR-206ENST00000474584 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
RPGR-206ENST00000474584 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
RPGR-206ENST00000474584 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
RPGR-206ENST00000474584 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
RPGR-206ENST00000474584 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 SCAPERQ9BY12 1400 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 ZFYVE16Q7Z3T8 1539 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms