RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 E9PCH4 1651 aa27.56■■■□□ 2
FSCN1-205ENST00000473330 BRD4O60885 1362 aaPredicted RBP27.56■■■□□ 2
FSCN1-205ENST00000473330 MYBBP1AQ9BQG0 1328 aaKnown RBP27.55■■■□□ 2
FSCN1-205ENST00000473330 KTN1Q86UP2 1357 aaKnown RBP27.55■■■□□ 2
FSCN1-205ENST00000473330 HNRNPMP52272 730 aaKnown RBP eCLIP27.53■■■□□ 2
FSCN1-205ENST00000473330 RALBP1Q15311 655 aa27.53■■■□□ 2
FSCN1-205ENST00000473330 ARHGEF5Q12774 1597 aa27.53■■■□□ 2
FSCN1-205ENST00000473330 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
FSCN1-205ENST00000473330 NOP58Q9Y2X3 529 aaKnown RBP27.48■■□□□ 1.99
FSCN1-205ENST00000473330 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
FSCN1-205ENST00000473330 TRPM1Q7Z4N2 1603 aa27.44■■□□□ 1.98
FSCN1-205ENST00000473330 PRAG1Q86YV5 1406 aa27.43■■□□□ 1.98
FSCN1-205ENST00000473330 SAMD9LQ8IVG5 1584 aa27.42■■□□□ 1.98
FSCN1-205ENST00000473330 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
FSCN1-205ENST00000473330 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
FSCN1-205ENST00000473330 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
FSCN1-205ENST00000473330 PARD3Q8TEW0 1356 aa27.41■■□□□ 1.98
FSCN1-205ENST00000473330 RRP1P56182 461 aaKnown RBP27.4■■□□□ 1.98
FSCN1-205ENST00000473330 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
FSCN1-205ENST00000473330 NLRP13Q86W25 1043 aa27.39■■□□□ 1.97
FSCN1-205ENST00000473330 CCDC144AA2RUR9 1427 aa27.37■■□□□ 1.97
FSCN1-205ENST00000473330 PREX2Q70Z35 1606 aa27.37■■□□□ 1.97
FSCN1-205ENST00000473330 PER1O15534 1290 aaPredicted RBP27.36■■□□□ 1.97
FSCN1-205ENST00000473330 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
FSCN1-205ENST00000473330 RCAN3Q9UKA8 241 aa27.34■■□□□ 1.97
FSCN1-205ENST00000473330 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
FSCN1-205ENST00000473330 IPO9Q96P70 1041 aaKnown RBP27.33■■□□□ 1.97
FSCN1-205ENST00000473330 GPRASP1Q5JY77 1395 aa27.33■■□□□ 1.97
FSCN1-205ENST00000473330 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
FSCN1-205ENST00000473330 ANP32AP39687 249 aaKnown RBP27.33■■□□□ 1.97
FSCN1-205ENST00000473330 EXOC6Q8TAG9 804 aa27.33■■□□□ 1.97
FSCN1-205ENST00000473330 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
FSCN1-205ENST00000473330 SALL2Q9Y467 1007 aaPredicted RBP27.32■■□□□ 1.96
FSCN1-205ENST00000473330 PDE3BQ13370 1112 aa27.31■■□□□ 1.96
FSCN1-205ENST00000473330 UNC13BO14795 1591 aa27.3■■□□□ 1.96
FSCN1-205ENST00000473330 A2MP01023 1474 aa27.3■■□□□ 1.96
FSCN1-205ENST00000473330 COL17A1Q9UMD9 1497 aaPredicted RBP27.29■■□□□ 1.96
FSCN1-205ENST00000473330 LAMC1P11047 1609 aa27.28■■□□□ 1.96
FSCN1-205ENST00000473330 PRDM15P57071 1507 aaPredicted RBP27.27■■□□□ 1.96
FSCN1-205ENST00000473330 SYCP2Q9BX26 1530 aa27.27■■□□□ 1.96
FSCN1-205ENST00000473330 MAST1Q9Y2H9 1570 aa27.27■■□□□ 1.96
FSCN1-205ENST00000473330 DEKP35659 375 aaKnown RBP27.26■■□□□ 1.96
FSCN1-205ENST00000473330 TESK2Q96S53 571 aa27.26■■□□□ 1.96
FSCN1-205ENST00000473330 DISP3Q9P2K9 1392 aa27.26■■□□□ 1.95
FSCN1-205ENST00000473330 NBR1Q14596 966 aa27.24■■□□□ 1.95
FSCN1-205ENST00000473330 WASHC2CQ9Y4E1 1318 aa27.24■■□□□ 1.95
FSCN1-205ENST00000473330 CDCA7LQ96GN5 454 aa27.23■■□□□ 1.95
FSCN1-205ENST00000473330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
FSCN1-205ENST00000473330 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
FSCN1-205ENST00000473330 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
FSCN1-205ENST00000473330 IQGAP3Q86VI3 1631 aa27.21■■□□□ 1.95
FSCN1-205ENST00000473330 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
FSCN1-205ENST00000473330 TTC37Q6PGP7 1564 aa27.2■■□□□ 1.95
FSCN1-205ENST00000473330 INSRP06213 1382 aa27.2■■□□□ 1.94
FSCN1-205ENST00000473330 TCERG1O14776 1098 aaKnown RBP27.2■■□□□ 1.94
FSCN1-205ENST00000473330 BLMP54132 1417 aaPredicted RBP27.19■■□□□ 1.94
FSCN1-205ENST00000473330 ERBINQ96RT1 1412 aa27.19■■□□□ 1.94
FSCN1-205ENST00000473330 ARHGAP5Q13017 1502 aa27.19■■□□□ 1.94
FSCN1-205ENST00000473330 PANK3Q9H999 370 aa27.19■■□□□ 1.94
FSCN1-205ENST00000473330 ZMYM4Q5VZL5 1548 aa27.18■■□□□ 1.94
FSCN1-205ENST00000473330 EIF2AK4Q9P2K8 1649 aaKnown RBP27.18■■□□□ 1.94
FSCN1-205ENST00000473330 PLEKHH2Q8IVE3 1493 aa27.17■■□□□ 1.94
FSCN1-205ENST00000473330 PLXNC1O60486 1568 aa27.17■■□□□ 1.94
FSCN1-205ENST00000473330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.942e-11■■■■■ 31.5
FSCN1-205ENST00000473330 ATP10AO60312 1499 aa27.14■■□□□ 1.94
FSCN1-205ENST00000473330 TMF1P82094 1093 aa27.13■■□□□ 1.93
FSCN1-205ENST00000473330 PDE4AP27815 886 aa27.12■■□□□ 1.93
FSCN1-205ENST00000473330 MAGI2Q86UL8 1455 aa27.1■■□□□ 1.93
FSCN1-205ENST00000473330 PLIN1O60240 522 aa27.1■■□□□ 1.93
FSCN1-205ENST00000473330 DUOX2Q9NRD8 1548 aa27.09■■□□□ 1.93
FSCN1-205ENST00000473330 MS4A1P11836 297 aa27.09■■□□□ 1.93
FSCN1-205ENST00000473330 BACH2Q9BYV9 841 aa27.08■■□□□ 1.93
FSCN1-205ENST00000473330 RNF17Q9BXT8 1623 aaKnown RBP27.08■■□□□ 1.93
FSCN1-205ENST00000473330 NPM2Q86SE8 214 aaKnown RBP27.06■■□□□ 1.92
FSCN1-205ENST00000473330 CRBNQ96SW2 442 aa27.04■■□□□ 1.92
FSCN1-205ENST00000473330 ADAMTS8Q9UP79 889 aa27.02■■□□□ 1.92
FSCN1-205ENST00000473330 WDR7Q9Y4E6 1490 aa27.01■■□□□ 1.91
FSCN1-205ENST00000473330 RTL5Q5HYW3 569 aaPredicted RBP26.99■■□□□ 1.91
FSCN1-205ENST00000473330 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
FSCN1-205ENST00000473330 CHD1O14646 1710 aa26.98■■□□□ 1.91
FSCN1-205ENST00000473330 ABCC2Q92887 1545 aa26.97■■□□□ 1.91
FSCN1-205ENST00000473330 MADDQ8WXG6 1647 aa26.96■■□□□ 1.91
FSCN1-205ENST00000473330 IQGAP1P46940 1657 aa26.96■■□□□ 1.91
FSCN1-205ENST00000473330 PPP2R1AP30153 589 aa26.96■■□□□ 1.91
FSCN1-205ENST00000473330 C20orf194Q5TEA3 1177 aa26.94■■□□□ 1.9
FSCN1-205ENST00000473330 SKAP1Q86WV1 359 aa26.94■■□□□ 1.9
FSCN1-205ENST00000473330 KNSTRNQ9Y448 316 aa26.94■■□□□ 1.9
FSCN1-205ENST00000473330 PLCH2O75038 1416 aa26.93■■□□□ 1.9
FSCN1-205ENST00000473330 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
FSCN1-205ENST00000473330 AMER1Q5JTC6 1135 aaPredicted RBP26.92■■□□□ 1.9
FSCN1-205ENST00000473330 ERCC6L2Q5T890 1561 aa26.92■■□□□ 1.9
FSCN1-205ENST00000473330 DUSP27Q5VZP5 1158 aa26.9■■□□□ 1.9
FSCN1-205ENST00000473330 WDR43Q15061 677 aaKnown RBP eCLIP26.89■■□□□ 1.893e-6■■■■□ 21.3
FSCN1-205ENST00000473330 ZNF521Q96K83 1311 aa26.89■■□□□ 1.89
FSCN1-205ENST00000473330 SYNMO15061 1565 aa26.88■■□□□ 1.89
FSCN1-205ENST00000473330 TRAPPC8Q9Y2L5 1435 aa26.88■■□□□ 1.89
FSCN1-205ENST00000473330 ABCC1P33527 1531 aa26.88■■□□□ 1.89
FSCN1-205ENST00000473330 KDM2BQ8NHM5 1336 aa26.88■■□□□ 1.89
FSCN1-205ENST00000473330 EFCAB2Q5VUJ9 269 aa26.88■■□□□ 1.89
FSCN1-205ENST00000473330 SPHKAPQ2M3C7 1700 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms