RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 NUP160Q12769 1436 aa18.81■□□□□ 0.6
ABCF3-210ENST00000473311 ATP10BO94823 1461 aa18.8■□□□□ 0.6
ABCF3-210ENST00000473311 ABCA8O94911 1581 aa18.79■□□□□ 0.6
ABCF3-210ENST00000473311 HNRNPMP52272 730 aaKnown RBP eCLIP18.79■□□□□ 0.6
ABCF3-210ENST00000473311 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
ABCF3-210ENST00000473311 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
ABCF3-210ENST00000473311 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
ABCF3-210ENST00000473311 MYBBP1AQ9BQG0 1328 aaKnown RBP18.75■□□□□ 0.59
ABCF3-210ENST00000473311 PTPRGP23470 1445 aa18.74■□□□□ 0.59
ABCF3-210ENST00000473311 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
ABCF3-210ENST00000473311 RALBP1Q15311 655 aa18.73■□□□□ 0.59
ABCF3-210ENST00000473311 LRPPRCP42704 1394 aaKnown RBP18.72■□□□□ 0.59
ABCF3-210ENST00000473311 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
ABCF3-210ENST00000473311 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
ABCF3-210ENST00000473311 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
ABCF3-210ENST00000473311 E9PCH4 1651 aa18.7■□□□□ 0.58
ABCF3-210ENST00000473311 CCDC141Q6ZP82 1450 aa18.7■□□□□ 0.58
ABCF3-210ENST00000473311 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
ABCF3-210ENST00000473311 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
ABCF3-210ENST00000473311 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
ABCF3-210ENST00000473311 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
ABCF3-210ENST00000473311 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
ABCF3-210ENST00000473311 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-210ENST00000473311 SAMD9LQ8IVG5 1584 aa18.67■□□□□ 0.58
ABCF3-210ENST00000473311 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
ABCF3-210ENST00000473311 PRAG1Q86YV5 1406 aa18.65■□□□□ 0.58
ABCF3-210ENST00000473311 TRPM1Q7Z4N2 1603 aa18.65■□□□□ 0.58
ABCF3-210ENST00000473311 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
ABCF3-210ENST00000473311 PREX2Q70Z35 1606 aa18.64■□□□□ 0.57
ABCF3-210ENST00000473311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
ABCF3-210ENST00000473311 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
ABCF3-210ENST00000473311 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
ABCF3-210ENST00000473311 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
ABCF3-210ENST00000473311 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
ABCF3-210ENST00000473311 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
ABCF3-210ENST00000473311 RCAN3Q9UKA8 241 aa18.6■□□□□ 0.57
ABCF3-210ENST00000473311 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-210ENST00000473311 SYCP2Q9BX26 1530 aa18.6■□□□□ 0.57
ABCF3-210ENST00000473311 EXOC6Q8TAG9 804 aa18.59■□□□□ 0.57
ABCF3-210ENST00000473311 PKNOX2Q96KN3 472 aa18.59■□□□□ 0.57
ABCF3-210ENST00000473311 IL27Q8NEV9 243 aa18.58■□□□□ 0.57
ABCF3-210ENST00000473311 A2MP01023 1474 aa18.58■□□□□ 0.56
ABCF3-210ENST00000473311 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.56
ABCF3-210ENST00000473311 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
ABCF3-210ENST00000473311 CC2D1BQ5T0F9 858 aaKnown RBP18.57■□□□□ 0.56
ABCF3-210ENST00000473311 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
ABCF3-210ENST00000473311 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
ABCF3-210ENST00000473311 UNC13BO14795 1591 aa18.56■□□□□ 0.56
ABCF3-210ENST00000473311 NBR1Q14596 966 aa18.56■□□□□ 0.56
ABCF3-210ENST00000473311 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
ABCF3-210ENST00000473311 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
ABCF3-210ENST00000473311 IPO9Q96P70 1041 aaKnown RBP18.55■□□□□ 0.56
ABCF3-210ENST00000473311 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
ABCF3-210ENST00000473311 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
ABCF3-210ENST00000473311 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
ABCF3-210ENST00000473311 PRDM15P57071 1507 aaPredicted RBP18.53■□□□□ 0.56
ABCF3-210ENST00000473311 MAST1Q9Y2H9 1570 aa18.53■□□□□ 0.56
ABCF3-210ENST00000473311 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
ABCF3-210ENST00000473311 TESK2Q96S53 571 aa18.53■□□□□ 0.56
ABCF3-210ENST00000473311 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
ABCF3-210ENST00000473311 PANK3Q9H999 370 aa18.52■□□□□ 0.56
ABCF3-210ENST00000473311 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.55
ABCF3-210ENST00000473311 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-210ENST00000473311 LAMC1P11047 1609 aa18.51■□□□□ 0.55
ABCF3-210ENST00000473311 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
ABCF3-210ENST00000473311 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
ABCF3-210ENST00000473311 IQGAP3Q86VI3 1631 aa18.51■□□□□ 0.55
ABCF3-210ENST00000473311 TMF1P82094 1093 aa18.5■□□□□ 0.55
ABCF3-210ENST00000473311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.5■□□□□ 0.55
ABCF3-210ENST00000473311 EIF2AK4Q9P2K8 1649 aaKnown RBP18.5■□□□□ 0.55
ABCF3-210ENST00000473311 PLXNC1O60486 1568 aa18.48■□□□□ 0.55
ABCF3-210ENST00000473311 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
ABCF3-210ENST00000473311 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
ABCF3-210ENST00000473311 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
ABCF3-210ENST00000473311 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-210ENST00000473311 PLIN1O60240 522 aa18.45■□□□□ 0.54
ABCF3-210ENST00000473311 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
ABCF3-210ENST00000473311 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
ABCF3-210ENST00000473311 GLIPR1L2Q4G1C9 344 aa18.45■□□□□ 0.54
ABCF3-210ENST00000473311 ATP10AO60312 1499 aa18.43■□□□□ 0.54
ABCF3-210ENST00000473311 CHD1O14646 1710 aa18.42■□□□□ 0.54
ABCF3-210ENST00000473311 PDE4AP27815 886 aa18.42■□□□□ 0.54
ABCF3-210ENST00000473311 INSRP06213 1382 aa18.42■□□□□ 0.54
ABCF3-210ENST00000473311 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
ABCF3-210ENST00000473311 ZMYM4Q5VZL5 1548 aa18.41■□□□□ 0.54
ABCF3-210ENST00000473311 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
ABCF3-210ENST00000473311 RNF17Q9BXT8 1623 aaKnown RBP18.4■□□□□ 0.54
ABCF3-210ENST00000473311 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
ABCF3-210ENST00000473311 ABCC2Q92887 1545 aa18.39■□□□□ 0.53
ABCF3-210ENST00000473311 ADAMTS8Q9UP79 889 aa18.39■□□□□ 0.53
ABCF3-210ENST00000473311 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
ABCF3-210ENST00000473311 MS4A1P11836 297 aa18.38■□□□□ 0.53
ABCF3-210ENST00000473311 BACH2Q9BYV9 841 aa18.38■□□□□ 0.53
ABCF3-210ENST00000473311 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
ABCF3-210ENST00000473311 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
ABCF3-210ENST00000473311 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
ABCF3-210ENST00000473311 ERCC6L2Q5T890 1561 aa18.36■□□□□ 0.53
ABCF3-210ENST00000473311 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
ABCF3-210ENST00000473311 WDR7Q9Y4E6 1490 aa18.35■□□□□ 0.53
ABCF3-210ENST00000473311 PLCH2O75038 1416 aa18.35■□□□□ 0.53
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