RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 COL9A1P20849 921 aa7.64□□□□□ -1.19
CSMD2-208ENST00000471438 KIAA1468Q9P260 1216 aa7.64□□□□□ -1.19
CSMD2-208ENST00000471438 TSR3Q9UJK0 312 aaKnown RBP7.63□□□□□ -1.19
CSMD2-208ENST00000471438 HPS5Q9UPZ3 1129 aa7.63□□□□□ -1.19
CSMD2-208ENST00000471438 CRISPLD2Q9H0B8 497 aa7.61□□□□□ -1.19
CSMD2-208ENST00000471438 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.61□□□□□ -1.19
CSMD2-208ENST00000471438 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
CSMD2-208ENST00000471438 V9GY48 417 aaPredicted RBP7.61□□□□□ -1.19
CSMD2-208ENST00000471438 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
CSMD2-208ENST00000471438 PCDHGA10Q9Y5H3 936 aa7.6□□□□□ -1.19
CSMD2-208ENST00000471438 ONECUT3O60422 494 aaPredicted RBP7.59□□□□□ -1.19
CSMD2-208ENST00000471438 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
CSMD2-208ENST00000471438 PDZRN3Q9UPQ7 1066 aa7.59□□□□□ -1.19
CSMD2-208ENST00000471438 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
CSMD2-208ENST00000471438 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
CSMD2-208ENST00000471438 FBXW7Q969H0 707 aa7.57□□□□□ -1.2
CSMD2-208ENST00000471438 PDE4AP27815 886 aa7.56□□□□□ -1.2
CSMD2-208ENST00000471438 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
CSMD2-208ENST00000471438 PKD2Q13563 968 aa7.55□□□□□ -1.2
CSMD2-208ENST00000471438 TJAP1Q5JTD0 557 aa7.55□□□□□ -1.2
CSMD2-208ENST00000471438 PPP4CP60510 307 aa7.54□□□□□ -1.2
CSMD2-208ENST00000471438 TRIM6-TRIM34B2RNG4 842 aa7.53□□□□□ -1.2
CSMD2-208ENST00000471438 PHF14O94880 888 aa7.53□□□□□ -1.2
CSMD2-208ENST00000471438 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.53□□□□□ -1.2
CSMD2-208ENST00000471438 HS6ST3Q8IZP7 471 aa7.52□□□□□ -1.21
CSMD2-208ENST00000471438 NCKAP5LQ9HCH0 1330 aa7.52□□□□□ -1.21
CSMD2-208ENST00000471438 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
CSMD2-208ENST00000471438 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
CSMD2-208ENST00000471438 MTRQ99707 1265 aa7.5□□□□□ -1.21
CSMD2-208ENST00000471438 DDX27Q96GQ7 796 aaKnown RBP7.49□□□□□ -1.21
CSMD2-208ENST00000471438 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
CSMD2-208ENST00000471438 RYDENQ9NUL5 291 aaKnown RBP7.48□□□□□ -1.21
CSMD2-208ENST00000471438 EPAS1Q99814 870 aa7.47□□□□□ -1.21
CSMD2-208ENST00000471438 ZNF516Q92618 1163 aa7.46□□□□□ -1.22
CSMD2-208ENST00000471438 GGCXP38435 758 aa7.45□□□□□ -1.22
CSMD2-208ENST00000471438 PKDCCQ504Y2 493 aa7.45□□□□□ -1.22
CSMD2-208ENST00000471438 PACS2Q86VP3 889 aa7.45□□□□□ -1.22
CSMD2-208ENST00000471438 EMILIN3Q9NT22 766 aa7.45□□□□□ -1.22
CSMD2-208ENST00000471438 MYT1Q01538 1121 aa7.44□□□□□ -1.22
CSMD2-208ENST00000471438 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
CSMD2-208ENST00000471438 SAMD7Q7Z3H4 446 aa7.44□□□□□ -1.22
CSMD2-208ENST00000471438 ABCC9O60706 1549 aa7.43□□□□□ -1.22
CSMD2-208ENST00000471438 POTECB2RU33 542 aa7.43□□□□□ -1.22
CSMD2-208ENST00000471438 CHGAP10645 457 aaKnown RBP7.43□□□□□ -1.22
CSMD2-208ENST00000471438 RBM33Q96EV2 1170 aaKnown RBP7.43□□□□□ -1.22
CSMD2-208ENST00000471438 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
CSMD2-208ENST00000471438 DGAT1O75907 488 aa7.41□□□□□ -1.22
CSMD2-208ENST00000471438 MFSD10Q14728 455 aa7.41□□□□□ -1.22
CSMD2-208ENST00000471438 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-208ENST00000471438 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
CSMD2-208ENST00000471438 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
CSMD2-208ENST00000471438 TMUB1Q9BVT8 246 aa7.39□□□□□ -1.23
CSMD2-208ENST00000471438 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
CSMD2-208ENST00000471438 SMAPO00193 183 aa7.37□□□□□ -1.23
CSMD2-208ENST00000471438 RNF40O75150 1001 aa7.37□□□□□ -1.23
CSMD2-208ENST00000471438 SLC19A1P41440 591 aa7.36□□□□□ -1.23
CSMD2-208ENST00000471438 APLP1P51693 650 aa7.36□□□□□ -1.23
CSMD2-208ENST00000471438 STK17AQ9UEE5 414 aa7.35□□□□□ -1.23
CSMD2-208ENST00000471438 FAM187AA6NFU0 413 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 HDGFP51858 240 aaKnown RBP7.34□□□□□ -1.23
CSMD2-208ENST00000471438 COPS2P61201 443 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 PRR20EP86478 221 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 PRR20CP86479 221 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 PRR20DP86480 221 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 PRR20BP86481 221 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 PRR20AP86496 221 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 DDX12PQ92771 950 aa7.34□□□□□ -1.23
CSMD2-208ENST00000471438 MAP3K7O43318 606 aa7.32□□□□□ -1.24
CSMD2-208ENST00000471438 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
CSMD2-208ENST00000471438 SPRYD7Q5W111 196 aa7.32□□□□□ -1.24
CSMD2-208ENST00000471438 ZNF598Q86UK7 904 aaKnown RBP7.32□□□□□ -1.24
CSMD2-208ENST00000471438 CDCA7LQ96GN5 454 aa7.32□□□□□ -1.24
CSMD2-208ENST00000471438 NISCHQ9Y2I1 1504 aa7.32□□□□□ -1.24
CSMD2-208ENST00000471438 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
CSMD2-208ENST00000471438 WFS1O76024 890 aa7.31□□□□□ -1.24
CSMD2-208ENST00000471438 EN1Q05925 392 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-208ENST00000471438 NECTIN2Q92692 538 aa7.31□□□□□ -1.24
CSMD2-208ENST00000471438 TATDN2Q93075 761 aa7.31□□□□□ -1.24
CSMD2-208ENST00000471438 PNMA3Q9UL41 463 aa7.31□□□□□ -1.24
CSMD2-208ENST00000471438 DPYSL4O14531 572 aa7.3□□□□□ -1.24
CSMD2-208ENST00000471438 ZPR1O75312 459 aa7.3□□□□□ -1.24
CSMD2-208ENST00000471438 PRSS12P56730 875 aa7.3□□□□□ -1.24
CSMD2-208ENST00000471438 NBR1Q14596 966 aa7.3□□□□□ -1.24
CSMD2-208ENST00000471438 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
CSMD2-208ENST00000471438 ST8SIA5O15466 376 aa7.29□□□□□ -1.24
CSMD2-208ENST00000471438 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-208ENST00000471438 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
CSMD2-208ENST00000471438 FAM198AQ9UFP1 575 aa7.29□□□□□ -1.24
CSMD2-208ENST00000471438 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-208ENST00000471438 ZNF697Q5TEC3 545 aa7.28□□□□□ -1.24
CSMD2-208ENST00000471438 C3orf80F5H4A9 247 aa7.27□□□□□ -1.25
CSMD2-208ENST00000471438 TNFRSF10AO00220 468 aa7.27□□□□□ -1.25
CSMD2-208ENST00000471438 CERKQ8TCT0 537 aa7.26□□□□□ -1.25
CSMD2-208ENST00000471438 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
CSMD2-208ENST00000471438 GTPBP6O43824 516 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-208ENST00000471438 GDF9O60383 454 aa7.25□□□□□ -1.25
CSMD2-208ENST00000471438 CAMK2BQ13554 666 aa7.25□□□□□ -1.25
CSMD2-208ENST00000471438 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
CSMD2-208ENST00000471438 WIPF1O43516 503 aa7.24□□□□□ -1.25
CSMD2-208ENST00000471438 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms