RNA–Protein interactions for RNA: ENST00000469765.5

LCK-208, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best)

Gene LCK, Length 2,126 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-208ENST00000469765 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
LCK-208ENST00000469765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
LCK-208ENST00000469765 ARHGAP5Q13017 1502 aa23.42■■□□□ 1.34
LCK-208ENST00000469765 UNC13BO14795 1591 aa23.42■■□□□ 1.34
LCK-208ENST00000469765 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
LCK-208ENST00000469765 PPP4R2Q9NY27 417 aa23.41■■□□□ 1.34
LCK-208ENST00000469765 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.34
LCK-208ENST00000469765 UHRF1BP1LA0JNW5 1464 aa23.39■■□□□ 1.34
LCK-208ENST00000469765 ANP32EQ9BTT0 268 aa23.38■■□□□ 1.33
LCK-208ENST00000469765 MYO5CQ9NQX4 1742 aa23.38■■□□□ 1.33
LCK-208ENST00000469765 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
LCK-208ENST00000469765 E9PCH4 1651 aa23.37■■□□□ 1.33
LCK-208ENST00000469765 CCDC144AA2RUR9 1427 aa23.36■■□□□ 1.33
LCK-208ENST00000469765 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
LCK-208ENST00000469765 PLXNC1O60486 1568 aa23.36■■□□□ 1.33
LCK-208ENST00000469765 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
LCK-208ENST00000469765 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
LCK-208ENST00000469765 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
LCK-208ENST00000469765 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
LCK-208ENST00000469765 PNISRQ8TF01 805 aaKnown RBP23.32■■□□□ 1.32
LCK-208ENST00000469765 RIMBP3CA6NJZ7 1639 aa23.32■■□□□ 1.32
LCK-208ENST00000469765 RIMBP3BA6NNM3 1639 aa23.32■■□□□ 1.32
LCK-208ENST00000469765 RIMBP3Q9UFD9 1639 aa23.32■■□□□ 1.32
LCK-208ENST00000469765 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
LCK-208ENST00000469765 A2MP01023 1474 aa23.29■■□□□ 1.32
LCK-208ENST00000469765 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
LCK-208ENST00000469765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.32
LCK-208ENST00000469765 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
LCK-208ENST00000469765 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
LCK-208ENST00000469765 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
LCK-208ENST00000469765 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
LCK-208ENST00000469765 BRD4O60885 1362 aaPredicted RBP23.26■■□□□ 1.31
LCK-208ENST00000469765 LAMC1P11047 1609 aa23.26■■□□□ 1.31
LCK-208ENST00000469765 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
LCK-208ENST00000469765 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
LCK-208ENST00000469765 MYBBP1AQ9BQG0 1328 aaKnown RBP23.26■■□□□ 1.31
LCK-208ENST00000469765 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
LCK-208ENST00000469765 RALBP1Q15311 655 aa23.25■■□□□ 1.31
LCK-208ENST00000469765 B4GALNT3Q6L9W6 998 aa23.24■■□□□ 1.31
LCK-208ENST00000469765 NBPF1Q3BBV0 1214 aa23.24■■□□□ 1.31
LCK-208ENST00000469765 ERBINQ96RT1 1412 aa23.23■■□□□ 1.31
LCK-208ENST00000469765 PLCH2O75038 1416 aa23.22■■□□□ 1.31
LCK-208ENST00000469765 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
LCK-208ENST00000469765 PRDM15P57071 1507 aaPredicted RBP23.22■■□□□ 1.31
LCK-208ENST00000469765 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
LCK-208ENST00000469765 ATP10AO60312 1499 aa23.22■■□□□ 1.31
LCK-208ENST00000469765 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
LCK-208ENST00000469765 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
LCK-208ENST00000469765 ABCC1P33527 1531 aa23.19■■□□□ 1.3
LCK-208ENST00000469765 FANCIQ9NVI1 1328 aa23.18■■□□□ 1.3
LCK-208ENST00000469765 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
LCK-208ENST00000469765 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
LCK-208ENST00000469765 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
LCK-208ENST00000469765 MSH5O43196 834 aa23.15■■□□□ 1.3
LCK-208ENST00000469765 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
LCK-208ENST00000469765 TRAPPC8Q9Y2L5 1435 aa23.14■■□□□ 1.29
LCK-208ENST00000469765 TESK2Q96S53 571 aa23.14■■□□□ 1.29
LCK-208ENST00000469765 DISP3Q9P2K9 1392 aa23.13■■□□□ 1.29
LCK-208ENST00000469765 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
LCK-208ENST00000469765 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
LCK-208ENST00000469765 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
LCK-208ENST00000469765 WDR7Q9Y4E6 1490 aa23.1■■□□□ 1.29
LCK-208ENST00000469765 ASXL2Q76L83 1435 aa23.09■■□□□ 1.29
LCK-208ENST00000469765 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
LCK-208ENST00000469765 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
LCK-208ENST00000469765 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
LCK-208ENST00000469765 RTEL1-TNFRSF6BF6WH68 1400 aa23.04■■□□□ 1.28
LCK-208ENST00000469765 TMF1P82094 1093 aa23.04■■□□□ 1.28
LCK-208ENST00000469765 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
LCK-208ENST00000469765 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
LCK-208ENST00000469765 TRPM2O94759 1503 aa23.03■■□□□ 1.28
LCK-208ENST00000469765 PANK3Q9H999 370 aa23.02■■□□□ 1.28
LCK-208ENST00000469765 CCDC136Q96JN2 1154 aa23.02■■□□□ 1.28
LCK-208ENST00000469765 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
LCK-208ENST00000469765 CEP152O94986 1710 aa23■■□□□ 1.27
LCK-208ENST00000469765 DEPDC5O75140 1603 aa23■■□□□ 1.27
LCK-208ENST00000469765 IQGAP1P46940 1657 aa23■■□□□ 1.27
LCK-208ENST00000469765 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
LCK-208ENST00000469765 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
LCK-208ENST00000469765 PTPRTO14522 1441 aa22.98■■□□□ 1.27
LCK-208ENST00000469765 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
LCK-208ENST00000469765 PDE3BQ13370 1112 aa22.97■■□□□ 1.27
LCK-208ENST00000469765 INSRP06213 1382 aa22.97■■□□□ 1.27
LCK-208ENST00000469765 RRP1P56182 461 aaKnown RBP22.96■■□□□ 1.27
LCK-208ENST00000469765 ZMYM4Q5VZL5 1548 aa22.96■■□□□ 1.27
LCK-208ENST00000469765 SALL2Q9Y467 1007 aaPredicted RBP22.96■■□□□ 1.27
LCK-208ENST00000469765 BLMP54132 1417 aaPredicted RBP22.96■■□□□ 1.27
LCK-208ENST00000469765 TET3O43151 1660 aa22.95■■□□□ 1.27
LCK-208ENST00000469765 ABCA9Q8IUA7 1624 aa22.94■■□□□ 1.26
LCK-208ENST00000469765 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
LCK-208ENST00000469765 RCAN3Q9UKA8 241 aa22.93■■□□□ 1.26
LCK-208ENST00000469765 ATP7AQ04656 1500 aa22.93■■□□□ 1.26
LCK-208ENST00000469765 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
LCK-208ENST00000469765 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
LCK-208ENST00000469765 FANCAO15360 1455 aa22.9■■□□□ 1.26
LCK-208ENST00000469765 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
LCK-208ENST00000469765 STAC3Q96MF2 364 aa22.9■■□□□ 1.26
LCK-208ENST00000469765 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
LCK-208ENST00000469765 KANK1Q14678 1352 aa22.87■■□□□ 1.25
LCK-208ENST00000469765 CDCA7LQ96GN5 454 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms