RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
SMC4-210ENST00000469762 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
SMC4-210ENST00000469762 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
SMC4-210ENST00000469762 KTN1Q86UP2 1357 aaKnown RBP13.82□□□□□ -0.2
SMC4-210ENST00000469762 ATP10BO94823 1461 aa13.81□□□□□ -0.2
SMC4-210ENST00000469762 RALBP1Q15311 655 aa13.81□□□□□ -0.2
SMC4-210ENST00000469762 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
SMC4-210ENST00000469762 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
SMC4-210ENST00000469762 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
SMC4-210ENST00000469762 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
SMC4-210ENST00000469762 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
SMC4-210ENST00000469762 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
SMC4-210ENST00000469762 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
SMC4-210ENST00000469762 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
SMC4-210ENST00000469762 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
SMC4-210ENST00000469762 NUP160Q12769 1436 aa13.78□□□□□ -0.2
SMC4-210ENST00000469762 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
SMC4-210ENST00000469762 NBPF1Q3BBV0 1214 aa13.78□□□□□ -0.2
SMC4-210ENST00000469762 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.2
SMC4-210ENST00000469762 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
SMC4-210ENST00000469762 SAMD9LQ8IVG5 1584 aa13.77□□□□□ -0.21
SMC4-210ENST00000469762 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.212e-9■□□□□ 8.7
SMC4-210ENST00000469762 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
SMC4-210ENST00000469762 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
SMC4-210ENST00000469762 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
SMC4-210ENST00000469762 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
SMC4-210ENST00000469762 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
SMC4-210ENST00000469762 TESK2Q96S53 571 aa13.75□□□□□ -0.21
SMC4-210ENST00000469762 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
SMC4-210ENST00000469762 COL17A1Q9UMD9 1497 aaPredicted RBP13.75□□□□□ -0.21
SMC4-210ENST00000469762 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
SMC4-210ENST00000469762 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
SMC4-210ENST00000469762 A2MP01023 1474 aa13.75□□□□□ -0.21
SMC4-210ENST00000469762 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
SMC4-210ENST00000469762 PDE4AP27815 886 aa13.74□□□□□ -0.21
SMC4-210ENST00000469762 MYO5CQ9NQX4 1742 aa13.74□□□□□ -0.21
SMC4-210ENST00000469762 LAMC1P11047 1609 aa13.74□□□□□ -0.21
SMC4-210ENST00000469762 TCERG1O14776 1098 aaKnown RBP13.73□□□□□ -0.21
SMC4-210ENST00000469762 PLIN1O60240 522 aa13.73□□□□□ -0.21
SMC4-210ENST00000469762 PLEKHD1A6NEE1 506 aa13.72□□□□□ -0.21
SMC4-210ENST00000469762 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
SMC4-210ENST00000469762 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
SMC4-210ENST00000469762 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
SMC4-210ENST00000469762 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
SMC4-210ENST00000469762 UNC13BO14795 1591 aa13.72□□□□□ -0.21
SMC4-210ENST00000469762 PREX2Q70Z35 1606 aa13.71□□□□□ -0.21
SMC4-210ENST00000469762 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.22
SMC4-210ENST00000469762 TSPY4P0CV99 314 aa13.7□□□□□ -0.22
SMC4-210ENST00000469762 TSPY10P0CW01 314 aa13.7□□□□□ -0.22
SMC4-210ENST00000469762 INSRP06213 1382 aa13.7□□□□□ -0.22
SMC4-210ENST00000469762 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
SMC4-210ENST00000469762 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
SMC4-210ENST00000469762 MS4A1P11836 297 aa13.69□□□□□ -0.22
SMC4-210ENST00000469762 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
SMC4-210ENST00000469762 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
SMC4-210ENST00000469762 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
SMC4-210ENST00000469762 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
SMC4-210ENST00000469762 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
SMC4-210ENST00000469762 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
SMC4-210ENST00000469762 FBLN2P98095 1184 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 PANK3Q9H999 370 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 IQGAP3Q86VI3 1631 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
SMC4-210ENST00000469762 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
SMC4-210ENST00000469762 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
SMC4-210ENST00000469762 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
SMC4-210ENST00000469762 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
SMC4-210ENST00000469762 CHD1O14646 1710 aa13.64□□□□□ -0.23
SMC4-210ENST00000469762 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
SMC4-210ENST00000469762 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
SMC4-210ENST00000469762 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
SMC4-210ENST00000469762 ATP10AO60312 1499 aa13.62□□□□□ -0.23
SMC4-210ENST00000469762 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
SMC4-210ENST00000469762 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
SMC4-210ENST00000469762 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
SMC4-210ENST00000469762 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
SMC4-210ENST00000469762 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
SMC4-210ENST00000469762 PLXNC1O60486 1568 aa13.61□□□□□ -0.23
SMC4-210ENST00000469762 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
SMC4-210ENST00000469762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.231e-7■■■□□ 17.3
SMC4-210ENST00000469762 DUSP27Q5VZP5 1158 aa13.6□□□□□ -0.23
SMC4-210ENST00000469762 NEFMP07197 916 aa13.6□□□□□ -0.23
SMC4-210ENST00000469762 MADDQ8WXG6 1647 aa13.58□□□□□ -0.24
SMC4-210ENST00000469762 MYOM1P52179 1685 aa13.58□□□□□ -0.24
SMC4-210ENST00000469762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■□ 25.5
SMC4-210ENST00000469762 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
SMC4-210ENST00000469762 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
SMC4-210ENST00000469762 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
SMC4-210ENST00000469762 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
SMC4-210ENST00000469762 ARHGAP5Q13017 1502 aa13.56□□□□□ -0.24
SMC4-210ENST00000469762 TMF1P82094 1093 aa13.56□□□□□ -0.24
SMC4-210ENST00000469762 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
SMC4-210ENST00000469762 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
SMC4-210ENST00000469762 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
SMC4-210ENST00000469762 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
SMC4-210ENST00000469762 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
SMC4-210ENST00000469762 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms