RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 MSH5O43196 834 aa17.33■□□□□ 0.36
ARHGEF3-204ENST00000465659 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
ARHGEF3-204ENST00000465659 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
ARHGEF3-204ENST00000465659 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF3-204ENST00000465659 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
ARHGEF3-204ENST00000465659 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
ARHGEF3-204ENST00000465659 RALBP1Q15311 655 aa17.3■□□□□ 0.36
ARHGEF3-204ENST00000465659 LAMC1P11047 1609 aa17.3■□□□□ 0.36
ARHGEF3-204ENST00000465659 PRAG1Q86YV5 1406 aa17.29■□□□□ 0.36
ARHGEF3-204ENST00000465659 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
ARHGEF3-204ENST00000465659 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
ARHGEF3-204ENST00000465659 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
ARHGEF3-204ENST00000465659 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
ARHGEF3-204ENST00000465659 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
ARHGEF3-204ENST00000465659 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.36
ARHGEF3-204ENST00000465659 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
ARHGEF3-204ENST00000465659 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.35
ARHGEF3-204ENST00000465659 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
ARHGEF3-204ENST00000465659 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
ARHGEF3-204ENST00000465659 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
ARHGEF3-204ENST00000465659 TTC37Q6PGP7 1564 aa17.26■□□□□ 0.35
ARHGEF3-204ENST00000465659 PLA2R1Q13018 1463 aa17.25■□□□□ 0.35
ARHGEF3-204ENST00000465659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.24■□□□□ 0.35
ARHGEF3-204ENST00000465659 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
ARHGEF3-204ENST00000465659 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
ARHGEF3-204ENST00000465659 ATP10AO60312 1499 aa17.23■□□□□ 0.35
ARHGEF3-204ENST00000465659 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 CHD1O14646 1710 aa17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 A2MP01023 1474 aa17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
ARHGEF3-204ENST00000465659 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
ARHGEF3-204ENST00000465659 COL17A1Q9UMD9 1497 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF3-204ENST00000465659 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF3-204ENST00000465659 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
ARHGEF3-204ENST00000465659 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
ARHGEF3-204ENST00000465659 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
ARHGEF3-204ENST00000465659 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
ARHGEF3-204ENST00000465659 INSRP06213 1382 aa17.18■□□□□ 0.34
ARHGEF3-204ENST00000465659 ZMYM4Q5VZL5 1548 aa17.18■□□□□ 0.34
ARHGEF3-204ENST00000465659 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
ARHGEF3-204ENST00000465659 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF3-204ENST00000465659 NBPF1Q3BBV0 1214 aa17.14■□□□□ 0.34
ARHGEF3-204ENST00000465659 CCDC136Q96JN2 1154 aa17.14■□□□□ 0.34
ARHGEF3-204ENST00000465659 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
ARHGEF3-204ENST00000465659 TESK2Q96S53 571 aa17.14■□□□□ 0.33
ARHGEF3-204ENST00000465659 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
ARHGEF3-204ENST00000465659 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
ARHGEF3-204ENST00000465659 PLCH2O75038 1416 aa17.11■□□□□ 0.33
ARHGEF3-204ENST00000465659 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
ARHGEF3-204ENST00000465659 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
ARHGEF3-204ENST00000465659 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
ARHGEF3-204ENST00000465659 ABCC1P33527 1531 aa17.09■□□□□ 0.33
ARHGEF3-204ENST00000465659 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
ARHGEF3-204ENST00000465659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■□□□ 12.8
ARHGEF3-204ENST00000465659 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.33
ARHGEF3-204ENST00000465659 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
ARHGEF3-204ENST00000465659 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
ARHGEF3-204ENST00000465659 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
ARHGEF3-204ENST00000465659 TMF1P82094 1093 aa17.06■□□□□ 0.32
ARHGEF3-204ENST00000465659 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
ARHGEF3-204ENST00000465659 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
ARHGEF3-204ENST00000465659 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
ARHGEF3-204ENST00000465659 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
ARHGEF3-204ENST00000465659 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
ARHGEF3-204ENST00000465659 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
ARHGEF3-204ENST00000465659 PANK3Q9H999 370 aa17.03■□□□□ 0.32
ARHGEF3-204ENST00000465659 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
ARHGEF3-204ENST00000465659 TRPM2O94759 1503 aa17.03■□□□□ 0.32
ARHGEF3-204ENST00000465659 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
ARHGEF3-204ENST00000465659 CEP152O94986 1710 aa17.02■□□□□ 0.32
ARHGEF3-204ENST00000465659 STAC3Q96MF2 364 aa17.02■□□□□ 0.31
ARHGEF3-204ENST00000465659 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
ARHGEF3-204ENST00000465659 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
ARHGEF3-204ENST00000465659 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
ARHGEF3-204ENST00000465659 WDR7Q9Y4E6 1490 aa17■□□□□ 0.31
ARHGEF3-204ENST00000465659 PTPRTO14522 1441 aa17■□□□□ 0.31
ARHGEF3-204ENST00000465659 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
ARHGEF3-204ENST00000465659 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
ARHGEF3-204ENST00000465659 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
ARHGEF3-204ENST00000465659 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
ARHGEF3-204ENST00000465659 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
ARHGEF3-204ENST00000465659 SYNMO15061 1565 aa16.98■□□□□ 0.31
ARHGEF3-204ENST00000465659 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
ARHGEF3-204ENST00000465659 TET3O43151 1660 aa16.97■□□□□ 0.31
ARHGEF3-204ENST00000465659 ANP32AP39687 249 aaKnown RBP16.96■□□□□ 0.31
ARHGEF3-204ENST00000465659 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
ARHGEF3-204ENST00000465659 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
ARHGEF3-204ENST00000465659 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.3
ARHGEF3-204ENST00000465659 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
ARHGEF3-204ENST00000465659 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
ARHGEF3-204ENST00000465659 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
ARHGEF3-204ENST00000465659 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
ARHGEF3-204ENST00000465659 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
ARHGEF3-204ENST00000465659 SALL2Q9Y467 1007 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF3-204ENST00000465659 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
ARHGEF3-204ENST00000465659 MS4A1P11836 297 aa16.92■□□□□ 0.3
ARHGEF3-204ENST00000465659 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF3-204ENST00000465659 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms