RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 DEPDC5O75140 1603 aa5.39□□□□□ -1.55
COL8A1-205ENST00000463753 SETD1AO15047 1707 aaKnown RBP5.39□□□□□ -1.55
COL8A1-205ENST00000463753 PTPRKQ15262 1439 aa5.38□□□□□ -1.55
COL8A1-205ENST00000463753 RTN4Q9NQC3 1192 aaKnown RBP5.38□□□□□ -1.55
COL8A1-205ENST00000463753 NCOA1Q15788 1441 aa5.38□□□□□ -1.55
COL8A1-205ENST00000463753 TSHZ2Q9NRE2 1034 aa5.37□□□□□ -1.55
COL8A1-205ENST00000463753 POLR1AO95602 1720 aaPredicted RBP5.37□□□□□ -1.55
COL8A1-205ENST00000463753 SALL2Q9Y467 1007 aaPredicted RBP5.37□□□□□ -1.55
COL8A1-205ENST00000463753 TNIKQ9UKE5 1360 aa5.36□□□□□ -1.55
COL8A1-205ENST00000463753 CD44P16070 742 aaKnown RBP5.36□□□□□ -1.55
COL8A1-205ENST00000463753 CARMIL2Q6F5E8 1435 aa5.35□□□□□ -1.55
COL8A1-205ENST00000463753 CNTLNQ9NXG0 1405 aa5.35□□□□□ -1.55
COL8A1-205ENST00000463753 UACAQ9BZF9 1416 aa5.35□□□□□ -1.55
COL8A1-205ENST00000463753 IFFO2Q5TF58 517 aa5.34□□□□□ -1.55
COL8A1-205ENST00000463753 UBE2Q2Q8WVN8 375 aa5.34□□□□□ -1.55
COL8A1-205ENST00000463753 CDK13Q14004 1512 aaKnown RBP5.34□□□□□ -1.55
COL8A1-205ENST00000463753 PAK3O75914 559 aaPredicted RBP5.34□□□□□ -1.55
COL8A1-205ENST00000463753 RAD54L2Q9Y4B4 1467 aa5.34□□□□□ -1.55
COL8A1-205ENST00000463753 AKNAQ7Z591 1439 aa5.34□□□□□ -1.55
COL8A1-205ENST00000463753 KIF12Q96FN5 646 aa5.34□□□□□ -1.56
COL8A1-205ENST00000463753 DCAF8Q5TAQ9 597 aa5.33□□□□□ -1.56
COL8A1-205ENST00000463753 TCOF1Q13428 1488 aaKnown RBP5.33□□□□□ -1.56
COL8A1-205ENST00000463753 LRRC9Q6ZRR7 1453 aa5.33□□□□□ -1.56
COL8A1-205ENST00000463753 LOC105371045A0A1W2PR82 267 aa5.33□□□□□ -1.56
COL8A1-205ENST00000463753 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.33□□□□□ -1.56
COL8A1-205ENST00000463753 DAXXQ9UER7 740 aaPredicted RBP5.33□□□□□ -1.56
COL8A1-205ENST00000463753 ZRANB1Q9UGI0 708 aa5.32□□□□□ -1.56
COL8A1-205ENST00000463753 RAPGEF6Q8TEU7 1601 aa5.31□□□□□ -1.56
COL8A1-205ENST00000463753 SPHKAPQ2M3C7 1700 aa5.31□□□□□ -1.56
COL8A1-205ENST00000463753 ZFYVE16Q7Z3T8 1539 aa5.31□□□□□ -1.56
COL8A1-205ENST00000463753 ECM2O94769 699 aaPredicted RBP5.31□□□□□ -1.56
COL8A1-205ENST00000463753 EVX2Q03828 476 aa5.31□□□□□ -1.56
COL8A1-205ENST00000463753 UHRF1BP1Q6BDS2 1440 aa5.31□□□□□ -1.56
COL8A1-205ENST00000463753 RNF25Q96BH1 459 aaPredicted RBP5.3□□□□□ -1.56
COL8A1-205ENST00000463753 C3P01024 1663 aa5.3□□□□□ -1.56
COL8A1-205ENST00000463753 TSPYL2Q9H2G4 693 aaPredicted RBP5.3□□□□□ -1.56
COL8A1-205ENST00000463753 CIZ1Q9ULV3 898 aaPredicted RBP5.3□□□□□ -1.56
COL8A1-205ENST00000463753 SUPT16HQ9Y5B9 1047 aaKnown RBP5.3□□□□□ -1.56
COL8A1-205ENST00000463753 IQGAP2Q13576 1575 aa5.29□□□□□ -1.56
COL8A1-205ENST00000463753 RAPGEF2Q9Y4G8 1499 aa5.29□□□□□ -1.56
COL8A1-205ENST00000463753 PKNOX2Q96KN3 472 aa5.29□□□□□ -1.56
COL8A1-205ENST00000463753 PODXL2Q9NZ53 605 aa5.29□□□□□ -1.56
COL8A1-205ENST00000463753 ALKQ9UM73 1620 aa5.29□□□□□ -1.56
COL8A1-205ENST00000463753 RIOK3O14730 519 aaKnown RBP5.28□□□□□ -1.56
COL8A1-205ENST00000463753 ZNF467Q7Z7K2 595 aaPredicted RBP5.28□□□□□ -1.56
COL8A1-205ENST00000463753 KDM5AP29375 1690 aaKnown RBP5.28□□□□□ -1.56
COL8A1-205ENST00000463753 SHPRHQ149N8 1683 aa5.28□□□□□ -1.56
COL8A1-205ENST00000463753 WRNQ14191 1432 aaPredicted RBP eCLIP5.28□□□□□ -1.56
COL8A1-205ENST00000463753 RGL2O15211 777 aa5.28□□□□□ -1.56
COL8A1-205ENST00000463753 MED14O60244 1454 aa5.28□□□□□ -1.56
COL8A1-205ENST00000463753 HAX1O00165 279 aa5.28□□□□□ -1.56
COL8A1-205ENST00000463753 ABCC3O15438 1527 aa5.27□□□□□ -1.57
COL8A1-205ENST00000463753 PHF12Q96QT6 1004 aa5.27□□□□□ -1.57
COL8A1-205ENST00000463753 TAOK2Q9UL54 1235 aa5.27□□□□□ -1.57
COL8A1-205ENST00000463753 VGFO15240 615 aaPredicted RBP5.27□□□□□ -1.57
COL8A1-205ENST00000463753 CCER1Q8TC90 406 aaPredicted RBP5.27□□□□□ -1.57
COL8A1-205ENST00000463753 TDRD9Q8NDG6 1382 aaKnown RBP5.27□□□□□ -1.57
COL8A1-205ENST00000463753 CD109Q6YHK3 1445 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 MAP3K13O43283 966 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 PYGBP11216 843 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 PTPRGP23470 1445 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 C9orf84Q5VXU9 1444 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 FGD6Q6ZV73 1430 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 DEKP35659 375 aaKnown RBP5.26□□□□□ -1.57
COL8A1-205ENST00000463753 BCANQ96GW7 911 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 GOLGA3Q08378 1498 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 KDM5DQ9BY66 1539 aa5.26□□□□□ -1.57
COL8A1-205ENST00000463753 IFNL1Q8IU54 200 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 SP7Q8TDD2 431 aaPredicted RBP5.25□□□□□ -1.57
COL8A1-205ENST00000463753 JPH4Q96JJ6 628 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 UNC13BO14795 1591 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 MYO3AQ8NEV4 1616 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 TIE1P35590 1138 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 HS6ST3Q8IZP7 471 aa5.25□□□□□ -1.57
COL8A1-205ENST00000463753 NWD1Q149M9 1564 aa5.24□□□□□ -1.57
COL8A1-205ENST00000463753 VWDEQ8N2E2 1590 aa5.24□□□□□ -1.57
COL8A1-205ENST00000463753 MS4A3Q96HJ5 214 aa5.24□□□□□ -1.57
COL8A1-205ENST00000463753 SUPT6HQ7KZ85 1726 aaKnown RBP5.24□□□□□ -1.57
COL8A1-205ENST00000463753 TRAPPC8Q9Y2L5 1435 aa5.23□□□□□ -1.57
COL8A1-205ENST00000463753 GABBR2O75899 941 aa5.23□□□□□ -1.57
COL8A1-205ENST00000463753 PDAP1Q13442 181 aaKnown RBP5.23□□□□□ -1.57
COL8A1-205ENST00000463753 PCDHB13Q9Y5F0 798 aa5.23□□□□□ -1.57
COL8A1-205ENST00000463753 ATP10AO60312 1499 aa5.22□□□□□ -1.57
COL8A1-205ENST00000463753 CTTNBP2Q8WZ74 1663 aa5.22□□□□□ -1.57
COL8A1-205ENST00000463753 DISP1Q96F81 1524 aa5.22□□□□□ -1.57
COL8A1-205ENST00000463753 ASTLQ6HA08 431 aaPredicted RBP5.22□□□□□ -1.57
COL8A1-205ENST00000463753 RBM19Q9Y4C8 960 aaKnown RBP5.22□□□□□ -1.57
COL8A1-205ENST00000463753 SLC34A2O95436 690 aa5.22□□□□□ -1.57
COL8A1-205ENST00000463753 ATP10BO94823 1461 aa5.21□□□□□ -1.58
COL8A1-205ENST00000463753 CAMSAP2Q08AD1 1489 aa5.21□□□□□ -1.58
COL8A1-205ENST00000463753 DENND4BO75064 1496 aaPredicted RBP5.21□□□□□ -1.58
COL8A1-205ENST00000463753 LAMC1P11047 1609 aa5.21□□□□□ -1.58
COL8A1-205ENST00000463753 ARHGAP23Q9P227 1491 aa5.2□□□□□ -1.58
COL8A1-205ENST00000463753 GALR2O43603 387 aaPredicted RBP5.2□□□□□ -1.58
COL8A1-205ENST00000463753 SIGLEC1Q9BZZ2 1709 aa5.2□□□□□ -1.58
COL8A1-205ENST00000463753 FAM135BQ49AJ0 1406 aa5.2□□□□□ -1.58
COL8A1-205ENST00000463753 PSEN1P49768 467 aa5.2□□□□□ -1.58
COL8A1-205ENST00000463753 PCDHB8Q9UN66 801 aa5.2□□□□□ -1.58
COL8A1-205ENST00000463753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.19□□□□□ -1.58
COL8A1-205ENST00000463753 ZFP91Q96JP5 570 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms