RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
CHRNA4-202ENST00000463705 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
CHRNA4-202ENST00000463705 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
CHRNA4-202ENST00000463705 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
CHRNA4-202ENST00000463705 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHRNA4-202ENST00000463705 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
CHRNA4-202ENST00000463705 NRDCO43847 1150 aa16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
CHRNA4-202ENST00000463705 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
CHRNA4-202ENST00000463705 DNTTIP2Q5QJE6 756 aaKnown RBP16.92■□□□□ 0.3
CHRNA4-202ENST00000463705 AMPHP49418 695 aa16.92■□□□□ 0.3
CHRNA4-202ENST00000463705 GPATCH3Q96I76 525 aa16.91■□□□□ 0.3
CHRNA4-202ENST00000463705 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
CHRNA4-202ENST00000463705 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
CHRNA4-202ENST00000463705 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
CHRNA4-202ENST00000463705 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
CHRNA4-202ENST00000463705 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
CHRNA4-202ENST00000463705 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
CHRNA4-202ENST00000463705 APBB1O00213 710 aa16.88■□□□□ 0.29
CHRNA4-202ENST00000463705 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
CHRNA4-202ENST00000463705 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
CHRNA4-202ENST00000463705 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
CHRNA4-202ENST00000463705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHRNA4-202ENST00000463705 COG3Q96JB2 828 aa16.87■□□□□ 0.29
CHRNA4-202ENST00000463705 E9PSI1 815 aa16.87■□□□□ 0.29
CHRNA4-202ENST00000463705 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
CHRNA4-202ENST00000463705 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHRNA4-202ENST00000463705 ANKRD50Q9ULJ7 1429 aa16.86■□□□□ 0.29
CHRNA4-202ENST00000463705 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
CHRNA4-202ENST00000463705 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
CHRNA4-202ENST00000463705 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
CHRNA4-202ENST00000463705 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
CHRNA4-202ENST00000463705 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-202ENST00000463705 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
CHRNA4-202ENST00000463705 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
CHRNA4-202ENST00000463705 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
CHRNA4-202ENST00000463705 CCDC7Q96M83 1385 aa16.82■□□□□ 0.28
CHRNA4-202ENST00000463705 RRP7AQ9Y3A4 280 aaKnown RBP16.82■□□□□ 0.28
CHRNA4-202ENST00000463705 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
CHRNA4-202ENST00000463705 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
CHRNA4-202ENST00000463705 KIF7Q2M1P5 1343 aa16.8■□□□□ 0.28
CHRNA4-202ENST00000463705 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
CHRNA4-202ENST00000463705 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
CHRNA4-202ENST00000463705 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
CHRNA4-202ENST00000463705 HECW1Q76N89 1606 aa16.79■□□□□ 0.28
CHRNA4-202ENST00000463705 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
CHRNA4-202ENST00000463705 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
CHRNA4-202ENST00000463705 GORABQ5T7V8 394 aa16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
CHRNA4-202ENST00000463705 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 TAF7LQ5H9L4 462 aa16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 NESP48681 1621 aa16.77■□□□□ 0.28
CHRNA4-202ENST00000463705 CHAF1AQ13111 956 aaPredicted RBP16.77■□□□□ 0.27
CHRNA4-202ENST00000463705 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.27
CHRNA4-202ENST00000463705 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.27
CHRNA4-202ENST00000463705 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-202ENST00000463705 NAP1L5Q96NT1 182 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-202ENST00000463705 TRIM6-TRIM34B2RNG4 842 aa16.76■□□□□ 0.27
CHRNA4-202ENST00000463705 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-202ENST00000463705 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 APAF1O14727 1248 aa16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-202ENST00000463705 PLIN1O60240 522 aa16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 CSPP1Q1MSJ5 1256 aa16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
CHRNA4-202ENST00000463705 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-202ENST00000463705 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
CHRNA4-202ENST00000463705 CCDC9Q9Y3X0 531 aaKnown RBP16.72■□□□□ 0.27
CHRNA4-202ENST00000463705 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
CHRNA4-202ENST00000463705 ROCK1Q13464 1354 aa16.71■□□□□ 0.27
CHRNA4-202ENST00000463705 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
CHRNA4-202ENST00000463705 CRBNQ96SW2 442 aa16.71■□□□□ 0.26
CHRNA4-202ENST00000463705 ST18O60284 1047 aa16.7■□□□□ 0.26
CHRNA4-202ENST00000463705 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
CHRNA4-202ENST00000463705 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
CHRNA4-202ENST00000463705 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
CHRNA4-202ENST00000463705 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
CHRNA4-202ENST00000463705 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 C9orf84Q5VXU9 1444 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms