RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 SCAPERQ9BY12 1400 aa10.51□□□□□ -0.73
MCF2L2-205ENST00000461074 ATP6V1DQ9Y5K8 247 aa10.51□□□□□ -0.73
MCF2L2-205ENST00000461074 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
MCF2L2-205ENST00000461074 FHOD3Q2V2M9 1422 aa10.5□□□□□ -0.73
MCF2L2-205ENST00000461074 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
MCF2L2-205ENST00000461074 SENP3Q9H4L4 574 aaPredicted RBP10.5□□□□□ -0.73
MCF2L2-205ENST00000461074 ST18O60284 1047 aa10.5□□□□□ -0.73
MCF2L2-205ENST00000461074 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
MCF2L2-205ENST00000461074 G3V3G9 751 aa10.49□□□□□ -0.73
MCF2L2-205ENST00000461074 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
MCF2L2-205ENST00000461074 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
MCF2L2-205ENST00000461074 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
MCF2L2-205ENST00000461074 COG3Q96JB2 828 aa10.48□□□□□ -0.73
MCF2L2-205ENST00000461074 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
MCF2L2-205ENST00000461074 PLEKHH2Q8IVE3 1493 aa10.48□□□□□ -0.73
MCF2L2-205ENST00000461074 C1orf141Q5JVX7 400 aa10.48□□□□□ -0.73
MCF2L2-205ENST00000461074 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
MCF2L2-205ENST00000461074 SAFB2Q14151 953 aaKnown RBP eCLIP10.47□□□□□ -0.73
MCF2L2-205ENST00000461074 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
MCF2L2-205ENST00000461074 E9PSI1 815 aa10.47□□□□□ -0.73
MCF2L2-205ENST00000461074 CLSTN1O94985 981 aa10.47□□□□□ -0.73
MCF2L2-205ENST00000461074 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
MCF2L2-205ENST00000461074 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 NEXNQ0ZGT2 675 aa10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 RUFY2Q8WXA3 655 aa10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 SOX12O15370 315 aa10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 CPLX2Q6PUV4 134 aaKnown RBP10.46□□□□□ -0.74
MCF2L2-205ENST00000461074 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-205ENST00000461074 KIF21BO75037 1637 aa10.45□□□□□ -0.74
MCF2L2-205ENST00000461074 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 DDX58O95786 925 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 NOL10Q9BSC4 688 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 FYCO1Q9BQS8 1478 aa10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 CENPQQ7L2Z9 268 aaPredicted RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 SKOR2Q2VWA4 1001 aaPredicted RBP10.44□□□□□ -0.74
MCF2L2-205ENST00000461074 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 NCAPD3P42695 1498 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 TPM2P07951 284 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 DHX57Q6P158 1386 aaKnown RBP10.43□□□□□ -0.74
MCF2L2-205ENST00000461074 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 NOC3LQ8WTT2 800 aaKnown RBP10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 GOLGA6L1Q8N7Z2 621 aa10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 TTC5Q8N0Z6 440 aa10.42□□□□□ -0.74
MCF2L2-205ENST00000461074 TPM3P06753 285 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 TEFQ10587 303 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 ZKSCAN2Q63HK3 967 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 REC8O95072 547 aa10.41□□□□□ -0.74
MCF2L2-205ENST00000461074 RASSF8Q8NHQ8 419 aa10.4□□□□□ -0.74
MCF2L2-205ENST00000461074 TPM1P09493 284 aa10.4□□□□□ -0.74
MCF2L2-205ENST00000461074 HOOK1Q9UJC3 728 aaKnown RBP10.4□□□□□ -0.74
MCF2L2-205ENST00000461074 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
MCF2L2-205ENST00000461074 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.75
MCF2L2-205ENST00000461074 SYNJ2O15056 1496 aa10.4□□□□□ -0.75
MCF2L2-205ENST00000461074 USP47Q96K76 1375 aa10.39□□□□□ -0.75
MCF2L2-205ENST00000461074 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-205ENST00000461074 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-205ENST00000461074 EVA1CP58658 441 aa10.39□□□□□ -0.75
MCF2L2-205ENST00000461074 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
MCF2L2-205ENST00000461074 ZBED9Q6R2W3 1325 aa10.38□□□□□ -0.75
MCF2L2-205ENST00000461074 CASKIN1Q8WXD9 1431 aa10.38□□□□□ -0.75
MCF2L2-205ENST00000461074 MARCH6O60337 910 aa10.38□□□□□ -0.75
MCF2L2-205ENST00000461074 SF3A1Q15459 793 aaKnown RBP10.38□□□□□ -0.75
MCF2L2-205ENST00000461074 HFM1A2PYH4 1435 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
MCF2L2-205ENST00000461074 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 ANKRD20A12PQ8NF67 263 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 DIAPH1O60610 1272 aaKnown RBP10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 SLC4A10Q6U841 1118 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 GNAI1P63096 354 aa10.36□□□□□ -0.75
MCF2L2-205ENST00000461074 H3BQV1 296 aa10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 TRIM29Q14134 588 aa10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 TRAK1Q9UPV9 953 aa10.35□□□□□ -0.75
MCF2L2-205ENST00000461074 IPO9Q96P70 1041 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms