RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
PTCD2-203ENST00000460837 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
PTCD2-203ENST00000460837 ARHGAP33O14559 1287 aa12.3□□□□□ -0.44
PTCD2-203ENST00000460837 CUX2O14529 1486 aa12.29□□□□□ -0.44
PTCD2-203ENST00000460837 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
PTCD2-203ENST00000460837 TBC1D12O60347 775 aa12.29□□□□□ -0.44
PTCD2-203ENST00000460837 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-203ENST00000460837 POLA1P09884 1462 aaPredicted RBP12.28□□□□□ -0.44
PTCD2-203ENST00000460837 WDR97A6NE52 1622 aa12.27□□□□□ -0.44
PTCD2-203ENST00000460837 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
PTCD2-203ENST00000460837 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
PTCD2-203ENST00000460837 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
PTCD2-203ENST00000460837 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
PTCD2-203ENST00000460837 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
PTCD2-203ENST00000460837 ADGRD1Q6QNK2 874 aa12.25□□□□□ -0.45
PTCD2-203ENST00000460837 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
PTCD2-203ENST00000460837 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
PTCD2-203ENST00000460837 PSEN2P49810 448 aa12.23□□□□□ -0.45
PTCD2-203ENST00000460837 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
PTCD2-203ENST00000460837 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCD2-203ENST00000460837 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
PTCD2-203ENST00000460837 BCANQ96GW7 911 aa12.21□□□□□ -0.45
PTCD2-203ENST00000460837 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.46
PTCD2-203ENST00000460837 SOGA1O94964 1423 aa12.2□□□□□ -0.46
PTCD2-203ENST00000460837 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
PTCD2-203ENST00000460837 CRISPLD2Q9H0B8 497 aa12.19□□□□□ -0.46
PTCD2-203ENST00000460837 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
PTCD2-203ENST00000460837 TK2O00142 265 aa12.18□□□□□ -0.46
PTCD2-203ENST00000460837 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
PTCD2-203ENST00000460837 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
PTCD2-203ENST00000460837 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
PTCD2-203ENST00000460837 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
PTCD2-203ENST00000460837 PDE4AP27815 886 aa12.15□□□□□ -0.46
PTCD2-203ENST00000460837 EIF4G3O43432 1585 aaKnown RBP12.14□□□□□ -0.47
PTCD2-203ENST00000460837 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
PTCD2-203ENST00000460837 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
PTCD2-203ENST00000460837 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
PTCD2-203ENST00000460837 HRO43593 1189 aa12.13□□□□□ -0.47
PTCD2-203ENST00000460837 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
PTCD2-203ENST00000460837 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
PTCD2-203ENST00000460837 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
PTCD2-203ENST00000460837 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
PTCD2-203ENST00000460837 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
PTCD2-203ENST00000460837 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
PTCD2-203ENST00000460837 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
PTCD2-203ENST00000460837 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
PTCD2-203ENST00000460837 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
PTCD2-203ENST00000460837 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
PTCD2-203ENST00000460837 EEA1Q15075 1411 aa12.09□□□□□ -0.47
PTCD2-203ENST00000460837 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
PTCD2-203ENST00000460837 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
PTCD2-203ENST00000460837 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
PTCD2-203ENST00000460837 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCD2-203ENST00000460837 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
PTCD2-203ENST00000460837 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
PTCD2-203ENST00000460837 CUL7Q14999 1698 aa12.06□□□□□ -0.48
PTCD2-203ENST00000460837 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
PTCD2-203ENST00000460837 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
PTCD2-203ENST00000460837 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
PTCD2-203ENST00000460837 EVI5O60447 810 aa12.04□□□□□ -0.48
PTCD2-203ENST00000460837 FOSBP53539 338 aa12.04□□□□□ -0.48
PTCD2-203ENST00000460837 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
PTCD2-203ENST00000460837 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.48
PTCD2-203ENST00000460837 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
PTCD2-203ENST00000460837 PTPREP23469 700 aa12.01□□□□□ -0.49
PTCD2-203ENST00000460837 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
PTCD2-203ENST00000460837 IGF1RP08069 1367 aa12.01□□□□□ -0.49
PTCD2-203ENST00000460837 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
PTCD2-203ENST00000460837 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
PTCD2-203ENST00000460837 KIF21BO75037 1637 aa11.98□□□□□ -0.49
PTCD2-203ENST00000460837 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
PTCD2-203ENST00000460837 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
PTCD2-203ENST00000460837 CHD1O14646 1710 aa11.97□□□□□ -0.49
PTCD2-203ENST00000460837 PTPN5P54829 565 aa11.97□□□□□ -0.49
PTCD2-203ENST00000460837 MFSD10Q14728 455 aa11.97□□□□□ -0.49
PTCD2-203ENST00000460837 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
PTCD2-203ENST00000460837 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
PTCD2-203ENST00000460837 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
PTCD2-203ENST00000460837 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
PTCD2-203ENST00000460837 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
PTCD2-203ENST00000460837 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
PTCD2-203ENST00000460837 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
PTCD2-203ENST00000460837 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
PTCD2-203ENST00000460837 GOLGA8CPA6NN73 597 aa11.93□□□□□ -0.5
PTCD2-203ENST00000460837 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
PTCD2-203ENST00000460837 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
PTCD2-203ENST00000460837 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
PTCD2-203ENST00000460837 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-203ENST00000460837 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
PTCD2-203ENST00000460837 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
PTCD2-203ENST00000460837 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
PTCD2-203ENST00000460837 WNT2BQ93097 391 aa11.88□□□□□ -0.51
PTCD2-203ENST00000460837 PCDHGA10Q9Y5H3 936 aa11.88□□□□□ -0.51
PTCD2-203ENST00000460837 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
PTCD2-203ENST00000460837 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
PTCD2-203ENST00000460837 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
PTCD2-203ENST00000460837 NBPF3Q9H094 633 aa11.86□□□□□ -0.51
PTCD2-203ENST00000460837 NUP160Q12769 1436 aa11.86□□□□□ -0.51
PTCD2-203ENST00000460837 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
PTCD2-203ENST00000460837 PPP1R3GB7ZBB8 358 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms