RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
PTCD2-203ENST00000460837 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
PTCD2-203ENST00000460837 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
PTCD2-203ENST00000460837 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
PTCD2-203ENST00000460837 FOXD1Q16676 465 aa23.14■■□□□ 1.29
PTCD2-203ENST00000460837 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
PTCD2-203ENST00000460837 MSH5O43196 834 aa21.65■■□□□ 1.06
PTCD2-203ENST00000460837 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
PTCD2-203ENST00000460837 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
PTCD2-203ENST00000460837 ADRA2BP18089 450 aa21.57■■□□□ 1.04
PTCD2-203ENST00000460837 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
PTCD2-203ENST00000460837 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
PTCD2-203ENST00000460837 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
PTCD2-203ENST00000460837 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
PTCD2-203ENST00000460837 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
PTCD2-203ENST00000460837 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
PTCD2-203ENST00000460837 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
PTCD2-203ENST00000460837 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
PTCD2-203ENST00000460837 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
PTCD2-203ENST00000460837 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
PTCD2-203ENST00000460837 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
PTCD2-203ENST00000460837 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
PTCD2-203ENST00000460837 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
PTCD2-203ENST00000460837 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
PTCD2-203ENST00000460837 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
PTCD2-203ENST00000460837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTCD2-203ENST00000460837 KCNA4P22459 653 aa17.94■□□□□ 0.46
PTCD2-203ENST00000460837 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
PTCD2-203ENST00000460837 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
PTCD2-203ENST00000460837 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
PTCD2-203ENST00000460837 CAPN15O75808 1086 aa17.43■□□□□ 0.38
PTCD2-203ENST00000460837 DSG3P32926 999 aa17.3■□□□□ 0.36
PTCD2-203ENST00000460837 APLP2Q06481 763 aa17.17■□□□□ 0.34
PTCD2-203ENST00000460837 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
PTCD2-203ENST00000460837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
PTCD2-203ENST00000460837 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
PTCD2-203ENST00000460837 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
PTCD2-203ENST00000460837 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
PTCD2-203ENST00000460837 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-203ENST00000460837 ABCB7O75027 752 aa17.03■□□□□ 0.32
PTCD2-203ENST00000460837 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
PTCD2-203ENST00000460837 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
PTCD2-203ENST00000460837 FOXD4L1Q9NU39 408 aa16.73■□□□□ 0.27
PTCD2-203ENST00000460837 POLA2Q14181 598 aa16.68■□□□□ 0.26
PTCD2-203ENST00000460837 POTEHQ6S545 545 aa16.61■□□□□ 0.25
PTCD2-203ENST00000460837 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
PTCD2-203ENST00000460837 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
PTCD2-203ENST00000460837 ZBTB22O15209 634 aa16.47■□□□□ 0.23
PTCD2-203ENST00000460837 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
PTCD2-203ENST00000460837 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
PTCD2-203ENST00000460837 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
PTCD2-203ENST00000460837 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
PTCD2-203ENST00000460837 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
PTCD2-203ENST00000460837 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
PTCD2-203ENST00000460837 FBLN2P98095 1184 aa15.92■□□□□ 0.14
PTCD2-203ENST00000460837 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
PTCD2-203ENST00000460837 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
PTCD2-203ENST00000460837 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
PTCD2-203ENST00000460837 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
PTCD2-203ENST00000460837 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
PTCD2-203ENST00000460837 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
PTCD2-203ENST00000460837 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
PTCD2-203ENST00000460837 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
PTCD2-203ENST00000460837 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTCD2-203ENST00000460837 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-203ENST00000460837 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
PTCD2-203ENST00000460837 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
PTCD2-203ENST00000460837 HAX1O00165 279 aa15.55■□□□□ 0.08
PTCD2-203ENST00000460837 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
PTCD2-203ENST00000460837 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
PTCD2-203ENST00000460837 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
PTCD2-203ENST00000460837 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
PTCD2-203ENST00000460837 EVX2Q03828 476 aa15.32■□□□□ 0.04
PTCD2-203ENST00000460837 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
PTCD2-203ENST00000460837 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
PTCD2-203ENST00000460837 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
PTCD2-203ENST00000460837 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
PTCD2-203ENST00000460837 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
PTCD2-203ENST00000460837 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
PTCD2-203ENST00000460837 GABBR2O75899 941 aa14.97□□□□□ -0.01
PTCD2-203ENST00000460837 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
PTCD2-203ENST00000460837 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
PTCD2-203ENST00000460837 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
PTCD2-203ENST00000460837 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
PTCD2-203ENST00000460837 CLCN6P51797 869 aa14.69□□□□□ -0.06
PTCD2-203ENST00000460837 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
PTCD2-203ENST00000460837 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
PTCD2-203ENST00000460837 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTCD2-203ENST00000460837 LHX8Q68G74 356 aa14.61□□□□□ -0.07
PTCD2-203ENST00000460837 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
PTCD2-203ENST00000460837 PROM2Q8N271 834 aa14.6□□□□□ -0.07
PTCD2-203ENST00000460837 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
PTCD2-203ENST00000460837 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
PTCD2-203ENST00000460837 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
PTCD2-203ENST00000460837 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
PTCD2-203ENST00000460837 ABCC9O60706 1549 aa14.48□□□□□ -0.09
PTCD2-203ENST00000460837 MIER1Q8N108 512 aa14.39□□□□□ -0.11
PTCD2-203ENST00000460837 TSPYL2Q9H2G4 693 aaPredicted RBP14.39□□□□□ -0.11
PTCD2-203ENST00000460837 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
PTCD2-203ENST00000460837 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms