RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 SKOR2Q2VWA4 1001 aaPredicted RBP10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 HOOK1Q9UJC3 728 aaKnown RBP10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 CCDC18Q5T9S5 1454 aa10.97□□□□□ -0.65
SHROOM4-203ENST00000460112 ANKRD20A12PQ8NF67 263 aa10.96□□□□□ -0.65
SHROOM4-203ENST00000460112 CCDC47Q96A33 483 aaKnown RBP10.96□□□□□ -0.65
SHROOM4-203ENST00000460112 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.66
SHROOM4-203ENST00000460112 CUX1P39880 1505 aa10.95□□□□□ -0.66
SHROOM4-203ENST00000460112 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
SHROOM4-203ENST00000460112 FRAT2O75474 233 aaPredicted RBP10.95□□□□□ -0.66
SHROOM4-203ENST00000460112 IPO7O95373 1038 aaKnown RBP10.95□□□□□ -0.66
SHROOM4-203ENST00000460112 SOX12O15370 315 aa10.95□□□□□ -0.66
SHROOM4-203ENST00000460112 WWC1Q8IX03 1113 aa10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 CCDC9Q9Y3X0 531 aaKnown RBP10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 CDR1P51861 262 aa10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 U2AF1L5P0DN76 240 aaPredicted RBP10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 U2AF1Q01081 240 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 H3BQV1 296 aa10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
SHROOM4-203ENST00000460112 SYNE3Q6ZMZ3 975 aa10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 RDXP35241 583 aaKnown RBP10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 IPO9Q96P70 1041 aaKnown RBP10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 APBB1O00213 710 aa10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 STAC3Q96MF2 364 aa10.93□□□□□ -0.66
SHROOM4-203ENST00000460112 WASHC2AQ641Q2 1341 aa10.92□□□□□ -0.66
SHROOM4-203ENST00000460112 GOLGA6L19H0YKK7 550 aa10.92□□□□□ -0.66
SHROOM4-203ENST00000460112 CREBRFQ8IUR6 639 aa10.92□□□□□ -0.66
SHROOM4-203ENST00000460112 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
SHROOM4-203ENST00000460112 RRP12Q5JTH9 1297 aaKnown RBP10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 CNKSR2Q8WXI2 1034 aa10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 SMC4Q9NTJ3 1288 aa10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 ROCK1Q13464 1354 aa10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 PDE4CQ08493 712 aa10.91□□□□□ -0.66
SHROOM4-203ENST00000460112 PES1O00541 588 aaKnown RBP10.9□□□□□ -0.66
SHROOM4-203ENST00000460112 CPLX2Q6PUV4 134 aaKnown RBP10.9□□□□□ -0.66
SHROOM4-203ENST00000460112 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
SHROOM4-203ENST00000460112 MLECQ14165 292 aa10.9□□□□□ -0.66
SHROOM4-203ENST00000460112 TRIM29Q14134 588 aa10.9□□□□□ -0.67
SHROOM4-203ENST00000460112 DHX8Q14562 1220 aaKnown RBP10.89□□□□□ -0.67
SHROOM4-203ENST00000460112 B4GALNT3Q6L9W6 998 aa10.89□□□□□ -0.67
SHROOM4-203ENST00000460112 TEX35Q5T0J7 233 aa10.89□□□□□ -0.67
SHROOM4-203ENST00000460112 CENPJQ9HC77 1338 aaPredicted RBP10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 FAM184AQ8NB25 1140 aa10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 CCDC43Q96MW1 224 aaKnown RBP10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 ZNF771Q7L3S4 317 aaPredicted RBP10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHROOM4-203ENST00000460112 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 AK7Q96M32 723 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 ACBD3Q9H3P7 528 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 STK26Q9P289 416 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 CUX2O14529 1486 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 KIF15Q9NS87 1388 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 AMPHP49418 695 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 BECN2A8MW95 431 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 CARMIL1Q5VZK9 1371 aa10.87□□□□□ -0.67
SHROOM4-203ENST00000460112 C1orf141Q5JVX7 400 aa10.86□□□□□ -0.67
SHROOM4-203ENST00000460112 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
SHROOM4-203ENST00000460112 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
SHROOM4-203ENST00000460112 KIF21BO75037 1637 aa10.86□□□□□ -0.67
SHROOM4-203ENST00000460112 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
SHROOM4-203ENST00000460112 EFCAB2Q5VUJ9 269 aa10.85□□□□□ -0.67
SHROOM4-203ENST00000460112 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
SHROOM4-203ENST00000460112 PDS5BQ9NTI5 1447 aa10.85□□□□□ -0.67
SHROOM4-203ENST00000460112 CENPQQ7L2Z9 268 aaPredicted RBP10.85□□□□□ -0.67
SHROOM4-203ENST00000460112 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 GZF1Q9H116 711 aaPredicted RBP10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 RUFY1Q96T51 708 aa10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 GGT6Q6P531 493 aa10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 DCTN1Q14203 1278 aa10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
SHROOM4-203ENST00000460112 PKD2Q13563 968 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 REC8O95072 547 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 ODF2Q5BJF6 829 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 DIAPH3Q9NSV4 1193 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 NUP155O75694 1391 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 PCMTD1Q96MG8 357 aaPredicted RBP10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 ZKSCAN1P17029 563 aaPredicted RBP10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 RNF20Q5VTR2 975 aa10.83□□□□□ -0.68
SHROOM4-203ENST00000460112 SLC4A10Q6U841 1118 aa10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 ERICH2A1L162 156 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms