RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
NUDCD3-203ENST00000460110 ARID4BQ4LE39 1312 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-203ENST00000460110 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
NUDCD3-203ENST00000460110 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
NUDCD3-203ENST00000460110 SAMD9LQ8IVG5 1584 aa12.84□□□□□ -0.35
NUDCD3-203ENST00000460110 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-203ENST00000460110 ZCCHC11Q5TAX3 1644 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-203ENST00000460110 NEFLP07196 543 aa12.81□□□□□ -0.36
NUDCD3-203ENST00000460110 SAFB2Q14151 953 aaKnown RBP eCLIP12.81□□□□□ -0.36
NUDCD3-203ENST00000460110 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
NUDCD3-203ENST00000460110 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
NUDCD3-203ENST00000460110 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
NUDCD3-203ENST00000460110 CC2D1BQ5T0F9 858 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-203ENST00000460110 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
NUDCD3-203ENST00000460110 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
NUDCD3-203ENST00000460110 SHROOM2Q13796 1616 aa12.79□□□□□ -0.36
NUDCD3-203ENST00000460110 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-203ENST00000460110 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.36
NUDCD3-203ENST00000460110 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
NUDCD3-203ENST00000460110 STK26Q9P289 416 aa12.77□□□□□ -0.37
NUDCD3-203ENST00000460110 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 FKBP8Q14318 412 aa12.76□□□□□ -0.37
NUDCD3-203ENST00000460110 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
NUDCD3-203ENST00000460110 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
NUDCD3-203ENST00000460110 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
NUDCD3-203ENST00000460110 PREX2Q70Z35 1606 aa12.74□□□□□ -0.37
NUDCD3-203ENST00000460110 TEX14Q8IWB6 1497 aa12.73□□□□□ -0.37
NUDCD3-203ENST00000460110 TMF1P82094 1093 aa12.73□□□□□ -0.37
NUDCD3-203ENST00000460110 MYO5CQ9NQX4 1742 aa12.73□□□□□ -0.37
NUDCD3-203ENST00000460110 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-203ENST00000460110 ARHGEF5Q12774 1597 aa12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 TNNT2P45379 298 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 PANK3Q9H999 370 aa12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
NUDCD3-203ENST00000460110 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
NUDCD3-203ENST00000460110 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-203ENST00000460110 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
NUDCD3-203ENST00000460110 KNSTRNQ9Y448 316 aa12.68□□□□□ -0.38
NUDCD3-203ENST00000460110 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-203ENST00000460110 ABCC1P33527 1531 aa12.67□□□□□ -0.38
NUDCD3-203ENST00000460110 ERBINQ96RT1 1412 aa12.67□□□□□ -0.38
NUDCD3-203ENST00000460110 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
NUDCD3-203ENST00000460110 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
NUDCD3-203ENST00000460110 ATP7AQ04656 1500 aa12.64□□□□□ -0.39
NUDCD3-203ENST00000460110 A2MP01023 1474 aa12.64□□□□□ -0.39
NUDCD3-203ENST00000460110 IDI1Q13907 227 aa12.64□□□□□ -0.39
NUDCD3-203ENST00000460110 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
NUDCD3-203ENST00000460110 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
NUDCD3-203ENST00000460110 POGKQ9P215 609 aa12.62□□□□□ -0.39
NUDCD3-203ENST00000460110 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
NUDCD3-203ENST00000460110 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
NUDCD3-203ENST00000460110 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-203ENST00000460110 CDCA8Q53HL2 280 aa12.6□□□□□ -0.39
NUDCD3-203ENST00000460110 DISP3Q9P2K9 1392 aa12.59□□□□□ -0.39
NUDCD3-203ENST00000460110 SPATA31E1Q6ZUB1 1445 aa12.59□□□□□ -0.39
NUDCD3-203ENST00000460110 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
NUDCD3-203ENST00000460110 POGZQ7Z3K3 1410 aa12.58□□□□□ -0.39
NUDCD3-203ENST00000460110 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.39
NUDCD3-203ENST00000460110 ZFYVE16Q7Z3T8 1539 aa12.58□□□□□ -0.4
NUDCD3-203ENST00000460110 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-203ENST00000460110 CEBPAP49715 358 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-203ENST00000460110 TESK2Q96S53 571 aa12.57□□□□□ -0.4
NUDCD3-203ENST00000460110 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-203ENST00000460110 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
NUDCD3-203ENST00000460110 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
NUDCD3-203ENST00000460110 NOS1P29475 1434 aa12.56□□□□□ -0.4
NUDCD3-203ENST00000460110 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
NUDCD3-203ENST00000460110 TSPOAP1O95153 1857 aa12.55□□□□□ -0.4
NUDCD3-203ENST00000460110 ATP10AO60312 1499 aa12.55□□□□□ -0.4
NUDCD3-203ENST00000460110 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
NUDCD3-203ENST00000460110 MAST1Q9Y2H9 1570 aa12.55□□□□□ -0.4
NUDCD3-203ENST00000460110 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-203ENST00000460110 RALBP1Q15311 655 aa12.54□□□□□ -0.4
NUDCD3-203ENST00000460110 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
NUDCD3-203ENST00000460110 ABCA9Q8IUA7 1624 aa12.54□□□□□ -0.4
NUDCD3-203ENST00000460110 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
NUDCD3-203ENST00000460110 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
NUDCD3-203ENST00000460110 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
NUDCD3-203ENST00000460110 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
NUDCD3-203ENST00000460110 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-203ENST00000460110 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.4
NUDCD3-203ENST00000460110 NPATQ14207 1427 aa12.52□□□□□ -0.4
NUDCD3-203ENST00000460110 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-203ENST00000460110 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.41
NUDCD3-203ENST00000460110 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
NUDCD3-203ENST00000460110 CCDC146Q8IYE0 955 aa12.51□□□□□ -0.41
NUDCD3-203ENST00000460110 SLC52A1Q9NWF4 448 aa12.51□□□□□ -0.41
NUDCD3-203ENST00000460110 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
NUDCD3-203ENST00000460110 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-203ENST00000460110 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
NUDCD3-203ENST00000460110 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
NUDCD3-203ENST00000460110 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
NUDCD3-203ENST00000460110 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
NUDCD3-203ENST00000460110 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms