RNA–Protein interactions for RNA: ENST00000459877.1

KCNC4-205, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 7,597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-205ENST00000459877 H3BQV1 296 aa11.42□□□□□ -0.58
KCNC4-205ENST00000459877 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
KCNC4-205ENST00000459877 TRIM34Q9BYJ4 488 aa11.42□□□□□ -0.58
KCNC4-205ENST00000459877 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
KCNC4-205ENST00000459877 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
KCNC4-205ENST00000459877 PTMSP20962 102 aa11.41□□□□□ -0.58
KCNC4-205ENST00000459877 SF3A1Q15459 793 aaKnown RBP11.41□□□□□ -0.58
KCNC4-205ENST00000459877 CUX2O14529 1486 aa11.41□□□□□ -0.58
KCNC4-205ENST00000459877 CCAR2Q8N163 923 aaKnown RBP11.41□□□□□ -0.58
KCNC4-205ENST00000459877 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
KCNC4-205ENST00000459877 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
KCNC4-205ENST00000459877 KIF16BQ96L93 1317 aa11.4□□□□□ -0.58
KCNC4-205ENST00000459877 CTDP1Q9Y5B0 961 aaPredicted RBP11.4□□□□□ -0.58
KCNC4-205ENST00000459877 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
KCNC4-205ENST00000459877 SYTL4Q96C24 671 aaPredicted RBP11.4□□□□□ -0.58
KCNC4-205ENST00000459877 HNRNPMP52272 730 aaKnown RBP eCLIP11.4□□□□□ -0.59
KCNC4-205ENST00000459877 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
KCNC4-205ENST00000459877 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
KCNC4-205ENST00000459877 TPM3P06753 285 aa11.39□□□□□ -0.59
KCNC4-205ENST00000459877 FOSBP53539 338 aa11.39□□□□□ -0.59
KCNC4-205ENST00000459877 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
KCNC4-205ENST00000459877 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
KCNC4-205ENST00000459877 MCTP1Q6DN14 999 aa11.38□□□□□ -0.59
KCNC4-205ENST00000459877 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
KCNC4-205ENST00000459877 HMMRO75330 724 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
KCNC4-205ENST00000459877 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 KIF3BO15066 747 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 CWC22Q9HCG8 908 aaKnown RBP11.37□□□□□ -0.59
KCNC4-205ENST00000459877 CCDC34Q96HJ3 373 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 NUP155O75694 1391 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
KCNC4-205ENST00000459877 BCL11BQ9C0K0 894 aaPredicted RBP11.37□□□□□ -0.59
KCNC4-205ENST00000459877 FAM184AQ8NB25 1140 aa11.36□□□□□ -0.59
KCNC4-205ENST00000459877 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
KCNC4-205ENST00000459877 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
KCNC4-205ENST00000459877 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
KCNC4-205ENST00000459877 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
KCNC4-205ENST00000459877 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
KCNC4-205ENST00000459877 AKAP17AQ02040 695 aaKnown RBP11.36□□□□□ -0.59
KCNC4-205ENST00000459877 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
KCNC4-205ENST00000459877 KDM4AO75164 1064 aa11.35□□□□□ -0.59
KCNC4-205ENST00000459877 TERF2IPQ9NYB0 399 aa11.35□□□□□ -0.59
KCNC4-205ENST00000459877 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
KCNC4-205ENST00000459877 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
KCNC4-205ENST00000459877 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
KCNC4-205ENST00000459877 WASHC2CQ9Y4E1 1318 aa11.34□□□□□ -0.59
KCNC4-205ENST00000459877 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
KCNC4-205ENST00000459877 ZNF592Q92610 1267 aa11.34□□□□□ -0.59
KCNC4-205ENST00000459877 TPM2P07951 284 aa11.34□□□□□ -0.59
KCNC4-205ENST00000459877 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
KCNC4-205ENST00000459877 APPP05067 770 aa11.34□□□□□ -0.59
KCNC4-205ENST00000459877 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.59
KCNC4-205ENST00000459877 ST18O60284 1047 aa11.33□□□□□ -0.6
KCNC4-205ENST00000459877 FYB1O15117 783 aa11.33□□□□□ -0.6
KCNC4-205ENST00000459877 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
KCNC4-205ENST00000459877 RALBP1Q15311 655 aa11.33□□□□□ -0.6
KCNC4-205ENST00000459877 VPS37DQ86XT2 251 aa11.33□□□□□ -0.6
KCNC4-205ENST00000459877 PHF14O94880 888 aa11.32□□□□□ -0.6
KCNC4-205ENST00000459877 PLIN1O60240 522 aa11.32□□□□□ -0.6
KCNC4-205ENST00000459877 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
KCNC4-205ENST00000459877 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
KCNC4-205ENST00000459877 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
KCNC4-205ENST00000459877 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
KCNC4-205ENST00000459877 SOGA1O94964 1423 aa11.31□□□□□ -0.6
KCNC4-205ENST00000459877 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
KCNC4-205ENST00000459877 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
KCNC4-205ENST00000459877 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
KCNC4-205ENST00000459877 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
KCNC4-205ENST00000459877 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
KCNC4-205ENST00000459877 GOLGA6L19H0YKK7 550 aa11.3□□□□□ -0.6
KCNC4-205ENST00000459877 CARMIL2Q6F5E8 1435 aa11.3□□□□□ -0.6
KCNC4-205ENST00000459877 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
KCNC4-205ENST00000459877 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
KCNC4-205ENST00000459877 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
KCNC4-205ENST00000459877 NFXL1Q6ZNB6 911 aa11.28□□□□□ -0.6
KCNC4-205ENST00000459877 TRIM29Q14134 588 aa11.28□□□□□ -0.6
KCNC4-205ENST00000459877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.6
KCNC4-205ENST00000459877 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.6
KCNC4-205ENST00000459877 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.6
KCNC4-205ENST00000459877 ANKRD30AQ9BXX3 1397 aa11.27□□□□□ -0.61
KCNC4-205ENST00000459877 COG3Q96JB2 828 aa11.27□□□□□ -0.61
KCNC4-205ENST00000459877 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
KCNC4-205ENST00000459877 DIAPH3Q9NSV4 1193 aa11.26□□□□□ -0.61
KCNC4-205ENST00000459877 BECN2A8MW95 431 aa11.26□□□□□ -0.61
KCNC4-205ENST00000459877 TPM1P09493 284 aa11.26□□□□□ -0.61
KCNC4-205ENST00000459877 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
KCNC4-205ENST00000459877 NAP1L1P55209 391 aaKnown RBP11.25□□□□□ -0.61
KCNC4-205ENST00000459877 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
KCNC4-205ENST00000459877 CCDC43Q96MW1 224 aaKnown RBP11.25□□□□□ -0.61
KCNC4-205ENST00000459877 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
KCNC4-205ENST00000459877 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
KCNC4-205ENST00000459877 EFCAB2Q5VUJ9 269 aa11.25□□□□□ -0.61
KCNC4-205ENST00000459877 PANK3Q9H999 370 aa11.25□□□□□ -0.61
KCNC4-205ENST00000459877 NACADO15069 1562 aa11.24□□□□□ -0.61
KCNC4-205ENST00000459877 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
KCNC4-205ENST00000459877 PSME1Q06323 249 aa11.24□□□□□ -0.61
KCNC4-205ENST00000459877 TEFQ10587 303 aa11.24□□□□□ -0.61
KCNC4-205ENST00000459877 NUTM2GQ5VZR2 741 aa11.24□□□□□ -0.61
KCNC4-205ENST00000459877 CCDC70Q6NSX1 233 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms