RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 PLSCR2Q9NRY7 297 aa10.5□□□□□ -0.73
CDKN3-205ENST00000458126 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
CDKN3-205ENST00000458126 POTEAQ6S8J7 498 aa10.48□□□□□ -0.73
CDKN3-205ENST00000458126 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
CDKN3-205ENST00000458126 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
CDKN3-205ENST00000458126 BCORL1Q5H9F3 1711 aa10.46□□□□□ -0.74
CDKN3-205ENST00000458126 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
CDKN3-205ENST00000458126 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
CDKN3-205ENST00000458126 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
CDKN3-205ENST00000458126 HS6ST3Q8IZP7 471 aa10.44□□□□□ -0.74
CDKN3-205ENST00000458126 NUP160Q12769 1436 aa10.43□□□□□ -0.74
CDKN3-205ENST00000458126 DOK7Q18PE1 504 aa10.43□□□□□ -0.74
CDKN3-205ENST00000458126 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
CDKN3-205ENST00000458126 MAP3K4Q9Y6R4 1608 aa10.43□□□□□ -0.74
CDKN3-205ENST00000458126 KIAA0586Q9BVV6 1533 aa10.43□□□□□ -0.74
CDKN3-205ENST00000458126 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
CDKN3-205ENST00000458126 PRG4Q92954 1404 aaPredicted RBP10.42□□□□□ -0.74
CDKN3-205ENST00000458126 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
CDKN3-205ENST00000458126 RIMS1Q86UR5 1692 aaKnown RBP10.41□□□□□ -0.74
CDKN3-205ENST00000458126 MARVELD3Q96A59 401 aa10.4□□□□□ -0.74
CDKN3-205ENST00000458126 PRDM2Q13029 1718 aa10.4□□□□□ -0.74
CDKN3-205ENST00000458126 PLB1Q6P1J6 1458 aa10.39□□□□□ -0.75
CDKN3-205ENST00000458126 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
CDKN3-205ENST00000458126 ZNF710Q8N1W2 664 aa10.39□□□□□ -0.75
CDKN3-205ENST00000458126 EMP3P54852 163 aa10.38□□□□□ -0.75
CDKN3-205ENST00000458126 HOXB1P14653 301 aaPredicted RBP10.37□□□□□ -0.75
CDKN3-205ENST00000458126 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
CDKN3-205ENST00000458126 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
CDKN3-205ENST00000458126 SOGA1O94964 1423 aa10.36□□□□□ -0.75
CDKN3-205ENST00000458126 ASXL2Q76L83 1435 aa10.36□□□□□ -0.75
CDKN3-205ENST00000458126 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
CDKN3-205ENST00000458126 PIP4K2BP78356 416 aa10.34□□□□□ -0.75
CDKN3-205ENST00000458126 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
CDKN3-205ENST00000458126 KIF3CO14782 793 aa10.33□□□□□ -0.76
CDKN3-205ENST00000458126 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
CDKN3-205ENST00000458126 PPP1R37O75864 691 aa10.31□□□□□ -0.76
CDKN3-205ENST00000458126 EPRSP07814 1512 aaKnown RBP10.31□□□□□ -0.76
CDKN3-205ENST00000458126 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
CDKN3-205ENST00000458126 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
CDKN3-205ENST00000458126 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
CDKN3-205ENST00000458126 SETBP1Q9Y6X0 1596 aa10.29□□□□□ -0.76
CDKN3-205ENST00000458126 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
CDKN3-205ENST00000458126 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
CDKN3-205ENST00000458126 TOM1O60784 492 aa10.28□□□□□ -0.76
CDKN3-205ENST00000458126 GPR153Q6NV75 609 aa10.28□□□□□ -0.76
CDKN3-205ENST00000458126 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
CDKN3-205ENST00000458126 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
CDKN3-205ENST00000458126 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
CDKN3-205ENST00000458126 YY1P25490 414 aa10.26□□□□□ -0.77
CDKN3-205ENST00000458126 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
CDKN3-205ENST00000458126 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
CDKN3-205ENST00000458126 ERBB3P21860 1342 aa10.25□□□□□ -0.77
CDKN3-205ENST00000458126 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
CDKN3-205ENST00000458126 ZNF335Q9H4Z2 1342 aaPredicted RBP10.25□□□□□ -0.77
CDKN3-205ENST00000458126 ABCC2Q92887 1545 aa10.24□□□□□ -0.77
CDKN3-205ENST00000458126 AMER1Q5JTC6 1135 aaPredicted RBP10.23□□□□□ -0.77
CDKN3-205ENST00000458126 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
CDKN3-205ENST00000458126 MAGI3Q5TCQ9 1506 aa10.21□□□□□ -0.78
CDKN3-205ENST00000458126 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
CDKN3-205ENST00000458126 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
CDKN3-205ENST00000458126 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
CDKN3-205ENST00000458126 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
CDKN3-205ENST00000458126 UHRF1BP1Q6BDS2 1440 aa10.18□□□□□ -0.78
CDKN3-205ENST00000458126 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
CDKN3-205ENST00000458126 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
CDKN3-205ENST00000458126 VARS2Q5ST30 1063 aaKnown RBP10.17□□□□□ -0.78
CDKN3-205ENST00000458126 CEP350Q5VT06 3117 aa10.17□□□□□ -0.78
CDKN3-205ENST00000458126 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
CDKN3-205ENST00000458126 LRP5O75197 1615 aa10.16□□□□□ -0.78
CDKN3-205ENST00000458126 FOXK1P85037 733 aa10.16□□□□□ -0.78
CDKN3-205ENST00000458126 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
CDKN3-205ENST00000458126 KIAA0556O60303 1618 aa10.15□□□□□ -0.79
CDKN3-205ENST00000458126 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CDKN3-205ENST00000458126 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
CDKN3-205ENST00000458126 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
CDKN3-205ENST00000458126 ALKQ9UM73 1620 aa10.14□□□□□ -0.79
CDKN3-205ENST00000458126 MMRN1Q13201 1228 aa10.13□□□□□ -0.79
CDKN3-205ENST00000458126 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDKN3-205ENST00000458126 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
CDKN3-205ENST00000458126 FGD5Q6ZNL6 1462 aa10.12□□□□□ -0.79
CDKN3-205ENST00000458126 ADAMTS12P58397 1594 aa10.12□□□□□ -0.79
CDKN3-205ENST00000458126 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
CDKN3-205ENST00000458126 PTCD2Q8WV60 388 aaKnown RBP10.11□□□□□ -0.79
CDKN3-205ENST00000458126 WIZO95785 1651 aa10.1□□□□□ -0.79
CDKN3-205ENST00000458126 CUL7Q14999 1698 aa10.1□□□□□ -0.79
CDKN3-205ENST00000458126 PTPRKQ15262 1439 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 POGZQ7Z3K3 1410 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 CUX1P39880 1505 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 NUDT7P0C024 238 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 DSG2Q14126 1118 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
CDKN3-205ENST00000458126 C1QTNF8P60827 252 aa10.08□□□□□ -0.8
CDKN3-205ENST00000458126 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
CDKN3-205ENST00000458126 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
CDKN3-205ENST00000458126 SETD1BQ9UPS6 1966 aaKnown RBP10.07□□□□□ -0.8
CDKN3-205ENST00000458126 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
CDKN3-205ENST00000458126 TBC1D12O60347 775 aa10.06□□□□□ -0.8
CDKN3-205ENST00000458126 PDE4AP27815 886 aa10.06□□□□□ -0.8
CDKN3-205ENST00000458126 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms