RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
LINC00473-202ENST00000455853 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
LINC00473-202ENST00000455853 FOXD1Q16676 465 aa17.38■□□□□ 0.37
LINC00473-202ENST00000455853 USP47Q96K76 1375 aa17.38■□□□□ 0.37
LINC00473-202ENST00000455853 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
LINC00473-202ENST00000455853 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
LINC00473-202ENST00000455853 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
LINC00473-202ENST00000455853 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
LINC00473-202ENST00000455853 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
LINC00473-202ENST00000455853 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
LINC00473-202ENST00000455853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00473-202ENST00000455853 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
LINC00473-202ENST00000455853 E9PCH4 1651 aa17.32■□□□□ 0.36
LINC00473-202ENST00000455853 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
LINC00473-202ENST00000455853 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
LINC00473-202ENST00000455853 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
LINC00473-202ENST00000455853 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
LINC00473-202ENST00000455853 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
LINC00473-202ENST00000455853 ZNF644Q9H582 1327 aaPredicted RBP17.3■□□□□ 0.36
LINC00473-202ENST00000455853 NEO1Q92859 1461 aa17.29■□□□□ 0.36
LINC00473-202ENST00000455853 TTC37Q6PGP7 1564 aa17.29■□□□□ 0.36
LINC00473-202ENST00000455853 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
LINC00473-202ENST00000455853 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
LINC00473-202ENST00000455853 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
LINC00473-202ENST00000455853 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.36
LINC00473-202ENST00000455853 RALBP1Q15311 655 aa17.27■□□□□ 0.36
LINC00473-202ENST00000455853 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
LINC00473-202ENST00000455853 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
LINC00473-202ENST00000455853 PKD2Q13563 968 aa17.26■□□□□ 0.35
LINC00473-202ENST00000455853 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
LINC00473-202ENST00000455853 FANCAO15360 1455 aa17.25■□□□□ 0.35
LINC00473-202ENST00000455853 ARHGEF5Q12774 1597 aa17.24■□□□□ 0.35
LINC00473-202ENST00000455853 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
LINC00473-202ENST00000455853 INSRP06213 1382 aa17.24■□□□□ 0.35
LINC00473-202ENST00000455853 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
LINC00473-202ENST00000455853 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
LINC00473-202ENST00000455853 PLCH2O75038 1416 aa17.23■□□□□ 0.35
LINC00473-202ENST00000455853 LAMC1P11047 1609 aa17.22■□□□□ 0.35
LINC00473-202ENST00000455853 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
LINC00473-202ENST00000455853 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
LINC00473-202ENST00000455853 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
LINC00473-202ENST00000455853 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
LINC00473-202ENST00000455853 FRMPD1Q5SYB0 1578 aa17.2■□□□□ 0.34
LINC00473-202ENST00000455853 NUP155O75694 1391 aa17.18■□□□□ 0.34
LINC00473-202ENST00000455853 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
LINC00473-202ENST00000455853 TRPM1Q7Z4N2 1603 aa17.16■□□□□ 0.34
LINC00473-202ENST00000455853 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
LINC00473-202ENST00000455853 DEKP35659 375 aaKnown RBP17.16■□□□□ 0.34
LINC00473-202ENST00000455853 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
LINC00473-202ENST00000455853 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
LINC00473-202ENST00000455853 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
LINC00473-202ENST00000455853 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
LINC00473-202ENST00000455853 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.34
LINC00473-202ENST00000455853 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.34
LINC00473-202ENST00000455853 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.33
LINC00473-202ENST00000455853 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
LINC00473-202ENST00000455853 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
LINC00473-202ENST00000455853 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
LINC00473-202ENST00000455853 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
LINC00473-202ENST00000455853 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
LINC00473-202ENST00000455853 EIF2AK4Q9P2K8 1649 aaKnown RBP17.12■□□□□ 0.33
LINC00473-202ENST00000455853 MS4A1P11836 297 aa17.12■□□□□ 0.33
LINC00473-202ENST00000455853 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
LINC00473-202ENST00000455853 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
LINC00473-202ENST00000455853 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
LINC00473-202ENST00000455853 MYO5CQ9NQX4 1742 aa17.12■□□□□ 0.33
LINC00473-202ENST00000455853 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
LINC00473-202ENST00000455853 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
LINC00473-202ENST00000455853 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
LINC00473-202ENST00000455853 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
LINC00473-202ENST00000455853 UNC13BO14795 1591 aa17.1■□□□□ 0.33
LINC00473-202ENST00000455853 YEATS2Q9ULM3 1422 aa17.1■□□□□ 0.33
LINC00473-202ENST00000455853 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
LINC00473-202ENST00000455853 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
LINC00473-202ENST00000455853 CCDC141Q6ZP82 1450 aa17.09■□□□□ 0.33
LINC00473-202ENST00000455853 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
LINC00473-202ENST00000455853 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
LINC00473-202ENST00000455853 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
LINC00473-202ENST00000455853 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.33
LINC00473-202ENST00000455853 AFAP1Q8N556 730 aa17.08■□□□□ 0.33
LINC00473-202ENST00000455853 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
LINC00473-202ENST00000455853 ARHGEF40Q8TER5 1519 aa17.07■□□□□ 0.32
LINC00473-202ENST00000455853 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
LINC00473-202ENST00000455853 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
LINC00473-202ENST00000455853 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
LINC00473-202ENST00000455853 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
LINC00473-202ENST00000455853 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
LINC00473-202ENST00000455853 CDC42BPBQ9Y5S2 1711 aa17.05■□□□□ 0.32
LINC00473-202ENST00000455853 MAGI2Q86UL8 1455 aa17.04■□□□□ 0.32
LINC00473-202ENST00000455853 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
LINC00473-202ENST00000455853 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
LINC00473-202ENST00000455853 PLXNC1O60486 1568 aa17.02■□□□□ 0.32
LINC00473-202ENST00000455853 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.32
LINC00473-202ENST00000455853 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.32
LINC00473-202ENST00000455853 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.31
LINC00473-202ENST00000455853 ABCC1P33527 1531 aa17■□□□□ 0.31
LINC00473-202ENST00000455853 ATP10AO60312 1499 aa17■□□□□ 0.31
LINC00473-202ENST00000455853 NBR1Q14596 966 aa17■□□□□ 0.31
LINC00473-202ENST00000455853 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
LINC00473-202ENST00000455853 KDM2AQ9Y2K7 1162 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms