RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PPP1R37O75864 691 aa8.09□□□□□ -1.11
HMGB1P4-201ENST00000455362 CABP2Q9NPB3 220 aa8.09□□□□□ -1.11
HMGB1P4-201ENST00000455362 GRIN2BQ13224 1484 aa8.08□□□□□ -1.12
HMGB1P4-201ENST00000455362 CUL7Q14999 1698 aa8.08□□□□□ -1.12
HMGB1P4-201ENST00000455362 PBRM1Q86U86 1689 aa8.08□□□□□ -1.12
HMGB1P4-201ENST00000455362 ILDR1Q86SU0 546 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P4-201ENST00000455362 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
HMGB1P4-201ENST00000455362 LARP6Q9BRS8 491 aaKnown RBP8.07□□□□□ -1.12
HMGB1P4-201ENST00000455362 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
HMGB1P4-201ENST00000455362 TRIM35Q9UPQ4 493 aa8.07□□□□□ -1.12
HMGB1P4-201ENST00000455362 EIF4G3O43432 1585 aaKnown RBP8.06□□□□□ -1.12
HMGB1P4-201ENST00000455362 MKRN3Q13064 507 aaKnown RBP8.05□□□□□ -1.12
HMGB1P4-201ENST00000455362 FHAD1B1AJZ9 1412 aa8.04□□□□□ -1.12
HMGB1P4-201ENST00000455362 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
HMGB1P4-201ENST00000455362 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 IRX5P78411 483 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 GOLGA2Q08379 1002 aa8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 FLIIQ13045 1269 aa8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 COLQQ9Y215 455 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 ARIH1Q9Y4X5 557 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 CEP162Q5TB80 1403 aa8.03□□□□□ -1.12
HMGB1P4-201ENST00000455362 MAGI1Q96QZ7 1491 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P4-201ENST00000455362 MFSD10Q14728 455 aa8.02□□□□□ -1.13
HMGB1P4-201ENST00000455362 GPIHBP1Q8IV16 184 aa8.02□□□□□ -1.13
HMGB1P4-201ENST00000455362 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 SNAPC4Q5SXM2 1469 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 POTEJP0CG39 1038 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 PDE4DQ08499 809 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 IER5LQ5T953 404 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 NECTIN2Q92692 538 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 NCKAP5LQ9HCH0 1330 aa8.01□□□□□ -1.13
HMGB1P4-201ENST00000455362 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
HMGB1P4-201ENST00000455362 TRIM66O15016 1216 aa8□□□□□ -1.13
HMGB1P4-201ENST00000455362 C7P10643 843 aa8□□□□□ -1.13
HMGB1P4-201ENST00000455362 SLC39A7Q92504 469 aa8□□□□□ -1.13
HMGB1P4-201ENST00000455362 CLIP1P30622 1438 aa7.99□□□□□ -1.13
HMGB1P4-201ENST00000455362 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
HMGB1P4-201ENST00000455362 CHMP7Q8WUX9 453 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P4-201ENST00000455362 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
HMGB1P4-201ENST00000455362 SYNJ2O15056 1496 aa7.99□□□□□ -1.13
HMGB1P4-201ENST00000455362 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
HMGB1P4-201ENST00000455362 CRISPLD2Q9H0B8 497 aa7.98□□□□□ -1.13
HMGB1P4-201ENST00000455362 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
HMGB1P4-201ENST00000455362 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
HMGB1P4-201ENST00000455362 MS4A4AQ96JQ5 239 aa7.97□□□□□ -1.13
HMGB1P4-201ENST00000455362 GRIN2AQ12879 1464 aa7.97□□□□□ -1.13
HMGB1P4-201ENST00000455362 CTTNBP2Q8WZ74 1663 aa7.97□□□□□ -1.13
HMGB1P4-201ENST00000455362 CAMK2BQ13554 666 aa7.96□□□□□ -1.14
HMGB1P4-201ENST00000455362 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
HMGB1P4-201ENST00000455362 DPY19L2Q6NUT2 758 aa7.94□□□□□ -1.14
HMGB1P4-201ENST00000455362 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
HMGB1P4-201ENST00000455362 OCEL1Q9H607 264 aa7.94□□□□□ -1.14
HMGB1P4-201ENST00000455362 ARHGAP35Q9NRY4 1499 aa7.94□□□□□ -1.14
HMGB1P4-201ENST00000455362 KIAA0586Q9BVV6 1533 aa7.93□□□□□ -1.14
HMGB1P4-201ENST00000455362 NUP160Q12769 1436 aa7.93□□□□□ -1.14
HMGB1P4-201ENST00000455362 CHD1O14646 1710 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 RAD21O60216 631 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 TRAK2O60296 914 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 ARAP1Q96P48 1450 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 IQGAP2Q13576 1575 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 CEP170Q5SW79 1584 aa7.92□□□□□ -1.14
HMGB1P4-201ENST00000455362 A6NJR5 290 aa7.91□□□□□ -1.14
HMGB1P4-201ENST00000455362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB1P4-201ENST00000455362 EFCAB5A4FU69 1503 aa7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 VPS8Q8N3P4 1428 aa7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 SPDYE16A6NNV3 312 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 PPP1R15BQ5SWA1 713 aa7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 JPH4Q96JJ6 628 aa7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 TRAIPQ9BWF2 469 aa7.9□□□□□ -1.14
HMGB1P4-201ENST00000455362 UGGT2Q9NYU1 1516 aa7.89□□□□□ -1.15
HMGB1P4-201ENST00000455362 MLLT3P42568 568 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P4-201ENST00000455362 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
HMGB1P4-201ENST00000455362 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
HMGB1P4-201ENST00000455362 SAMD9Q5K651 1589 aa7.88□□□□□ -1.15
HMGB1P4-201ENST00000455362 PLEKHG3A1L390 1219 aa7.87□□□□□ -1.15
HMGB1P4-201ENST00000455362 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
HMGB1P4-201ENST00000455362 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P4-201ENST00000455362 GPHNQ9NQX3 736 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P4-201ENST00000455362 FHOD3Q2V2M9 1422 aa7.86□□□□□ -1.15
HMGB1P4-201ENST00000455362 SEC24BO95487 1268 aa7.86□□□□□ -1.15
HMGB1P4-201ENST00000455362 PLCG2P16885 1265 aa7.86□□□□□ -1.15
HMGB1P4-201ENST00000455362 DISP1Q96F81 1524 aa7.86□□□□□ -1.15
HMGB1P4-201ENST00000455362 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P4-201ENST00000455362 DPYSL4O14531 572 aa7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 ONECUT3O60422 494 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 TMCO4Q5TGY1 634 aa7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 FMN1Q68DA7 1419 aa7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 CARMIL2Q6F5E8 1435 aa7.84□□□□□ -1.15
HMGB1P4-201ENST00000455362 KIAA0556O60303 1618 aa7.83□□□□□ -1.16
HMGB1P4-201ENST00000455362 PDIA6Q15084 440 aa7.83□□□□□ -1.16
HMGB1P4-201ENST00000455362 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
HMGB1P4-201ENST00000455362 PRG4Q92954 1404 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P4-201ENST00000455362 CLASP1Q7Z460 1538 aa7.83□□□□□ -1.16
HMGB1P4-201ENST00000455362 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
HMGB1P4-201ENST00000455362 CASKIN1Q8WXD9 1431 aa7.82□□□□□ -1.16
HMGB1P4-201ENST00000455362 GOPCQ9HD26 462 aa7.82□□□□□ -1.16
HMGB1P4-201ENST00000455362 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P4-201ENST00000455362 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P4-201ENST00000455362 RGS22Q8NE09 1264 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms