RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.45
LINC00299-204ENST00000454043 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
LINC00299-204ENST00000454043 KIF27Q86VH2 1401 aa12.27□□□□□ -0.45
LINC00299-204ENST00000454043 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
LINC00299-204ENST00000454043 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
LINC00299-204ENST00000454043 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
LINC00299-204ENST00000454043 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
LINC00299-204ENST00000454043 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
LINC00299-204ENST00000454043 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
LINC00299-204ENST00000454043 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
LINC00299-204ENST00000454043 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
LINC00299-204ENST00000454043 MAP3K9P80192 1104 aa12.23□□□□□ -0.45
LINC00299-204ENST00000454043 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
LINC00299-204ENST00000454043 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
LINC00299-204ENST00000454043 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
LINC00299-204ENST00000454043 EVI5O60447 810 aa12.2□□□□□ -0.46
LINC00299-204ENST00000454043 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
LINC00299-204ENST00000454043 RUSC2Q8N2Y8 1516 aa12.19□□□□□ -0.46
LINC00299-204ENST00000454043 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
LINC00299-204ENST00000454043 CUX2O14529 1486 aa12.18□□□□□ -0.46
LINC00299-204ENST00000454043 UBTFP17480 764 aaKnown RBP12.17□□□□□ -0.46
LINC00299-204ENST00000454043 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
LINC00299-204ENST00000454043 GOLGA3Q08378 1498 aa12.16□□□□□ -0.46
LINC00299-204ENST00000454043 PBX2P40425 430 aa12.16□□□□□ -0.46
LINC00299-204ENST00000454043 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
LINC00299-204ENST00000454043 WDR70Q9NW82 654 aa12.15□□□□□ -0.46
LINC00299-204ENST00000454043 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
LINC00299-204ENST00000454043 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
LINC00299-204ENST00000454043 WDR62O43379 1518 aa12.13□□□□□ -0.47
LINC00299-204ENST00000454043 ARHGAP33O14559 1287 aa12.13□□□□□ -0.47
LINC00299-204ENST00000454043 FOSBP53539 338 aa12.13□□□□□ -0.47
LINC00299-204ENST00000454043 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
LINC00299-204ENST00000454043 RAD54L2Q9Y4B4 1467 aa12.13□□□□□ -0.47
LINC00299-204ENST00000454043 KIF21BO75037 1637 aa12.12□□□□□ -0.47
LINC00299-204ENST00000454043 DPYSL4O14531 572 aa12.12□□□□□ -0.47
LINC00299-204ENST00000454043 E2F4Q16254 413 aa12.12□□□□□ -0.47
LINC00299-204ENST00000454043 IGF1RP08069 1367 aa12.12□□□□□ -0.47
LINC00299-204ENST00000454043 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00299-204ENST00000454043 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
LINC00299-204ENST00000454043 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
LINC00299-204ENST00000454043 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
LINC00299-204ENST00000454043 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
LINC00299-204ENST00000454043 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
LINC00299-204ENST00000454043 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
LINC00299-204ENST00000454043 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
LINC00299-204ENST00000454043 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
LINC00299-204ENST00000454043 PSEN2P49810 448 aa12.07□□□□□ -0.48
LINC00299-204ENST00000454043 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
LINC00299-204ENST00000454043 GAPVD1Q14C86 1478 aa12.07□□□□□ -0.48
LINC00299-204ENST00000454043 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
LINC00299-204ENST00000454043 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
LINC00299-204ENST00000454043 WDR97A6NE52 1622 aa12.05□□□□□ -0.48
LINC00299-204ENST00000454043 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
LINC00299-204ENST00000454043 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
LINC00299-204ENST00000454043 PCDHGA10Q9Y5H3 936 aa12.05□□□□□ -0.48
LINC00299-204ENST00000454043 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
LINC00299-204ENST00000454043 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
LINC00299-204ENST00000454043 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
LINC00299-204ENST00000454043 PTGER2P43116 358 aa12.04□□□□□ -0.48
LINC00299-204ENST00000454043 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
LINC00299-204ENST00000454043 PHF14O94880 888 aa12.02□□□□□ -0.49
LINC00299-204ENST00000454043 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
LINC00299-204ENST00000454043 CUL7Q14999 1698 aa12.01□□□□□ -0.49
LINC00299-204ENST00000454043 TK2O00142 265 aa12.01□□□□□ -0.49
LINC00299-204ENST00000454043 PDIA6Q15084 440 aa12.01□□□□□ -0.49
LINC00299-204ENST00000454043 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
LINC00299-204ENST00000454043 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
LINC00299-204ENST00000454043 KCNK17Q96T54 332 aa12□□□□□ -0.49
LINC00299-204ENST00000454043 GRIN2BQ13224 1484 aa12□□□□□ -0.49
LINC00299-204ENST00000454043 PTPREP23469 700 aa11.99□□□□□ -0.49
LINC00299-204ENST00000454043 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
LINC00299-204ENST00000454043 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00299-204ENST00000454043 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
LINC00299-204ENST00000454043 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
LINC00299-204ENST00000454043 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
LINC00299-204ENST00000454043 EPAS1Q99814 870 aa11.97□□□□□ -0.49
LINC00299-204ENST00000454043 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
LINC00299-204ENST00000454043 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
LINC00299-204ENST00000454043 CLIP1P30622 1438 aa11.96□□□□□ -0.49
LINC00299-204ENST00000454043 HRO43593 1189 aa11.96□□□□□ -0.49
LINC00299-204ENST00000454043 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
LINC00299-204ENST00000454043 DDX12PQ92771 950 aa11.95□□□□□ -0.5
LINC00299-204ENST00000454043 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
LINC00299-204ENST00000454043 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
LINC00299-204ENST00000454043 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
LINC00299-204ENST00000454043 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
LINC00299-204ENST00000454043 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
LINC00299-204ENST00000454043 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
LINC00299-204ENST00000454043 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
LINC00299-204ENST00000454043 RANGAP1P46060 587 aaPredicted RBP11.9□□□□□ -0.5
LINC00299-204ENST00000454043 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
LINC00299-204ENST00000454043 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
LINC00299-204ENST00000454043 CHMP7Q8WUX9 453 aaPredicted RBP11.89□□□□□ -0.51
LINC00299-204ENST00000454043 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
LINC00299-204ENST00000454043 COL9A1P20849 921 aa11.88□□□□□ -0.51
LINC00299-204ENST00000454043 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
LINC00299-204ENST00000454043 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
LINC00299-204ENST00000454043 BHMG1C9JSJ3 638 aaPredicted RBP11.87□□□□□ -0.51
LINC00299-204ENST00000454043 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
LINC00299-204ENST00000454043 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms