RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
SMARCA4-205ENST00000450717 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-205ENST00000450717 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
SMARCA4-205ENST00000450717 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
SMARCA4-205ENST00000450717 PTPRGP23470 1445 aa16.53■□□□□ 0.24
SMARCA4-205ENST00000450717 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
SMARCA4-205ENST00000450717 IGF1RP08069 1367 aa16.53■□□□□ 0.24
SMARCA4-205ENST00000450717 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-205ENST00000450717 E9PSI1 815 aa16.52■□□□□ 0.24
SMARCA4-205ENST00000450717 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
SMARCA4-205ENST00000450717 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.23
SMARCA4-205ENST00000450717 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
SMARCA4-205ENST00000450717 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
SMARCA4-205ENST00000450717 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
SMARCA4-205ENST00000450717 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
SMARCA4-205ENST00000450717 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
SMARCA4-205ENST00000450717 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-205ENST00000450717 KIF21BO75037 1637 aa16.5■□□□□ 0.23
SMARCA4-205ENST00000450717 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-205ENST00000450717 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
SMARCA4-205ENST00000450717 GOLGA6L3A6NEY3 463 aa16.49■□□□□ 0.23
SMARCA4-205ENST00000450717 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
SMARCA4-205ENST00000450717 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
SMARCA4-205ENST00000450717 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-205ENST00000450717 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 AMPHP49418 695 aa16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
SMARCA4-205ENST00000450717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.233e-7■■■■□ 26.2
SMARCA4-205ENST00000450717 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
SMARCA4-205ENST00000450717 SLC4A10Q6U841 1118 aa16.46■□□□□ 0.22
SMARCA4-205ENST00000450717 STAC3Q96MF2 364 aa16.46■□□□□ 0.22
SMARCA4-205ENST00000450717 ST18O60284 1047 aa16.45■□□□□ 0.22
SMARCA4-205ENST00000450717 ZKSCAN2Q63HK3 967 aa16.45■□□□□ 0.22
SMARCA4-205ENST00000450717 PDE4AP27815 886 aa16.44■□□□□ 0.22
SMARCA4-205ENST00000450717 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
SMARCA4-205ENST00000450717 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-205ENST00000450717 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
SMARCA4-205ENST00000450717 FYCO1Q9BQS8 1478 aa16.43■□□□□ 0.22
SMARCA4-205ENST00000450717 TPM4P67936 248 aa16.42■□□□□ 0.22
SMARCA4-205ENST00000450717 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
SMARCA4-205ENST00000450717 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
SMARCA4-205ENST00000450717 EXOC6Q8TAG9 804 aa16.42■□□□□ 0.22
SMARCA4-205ENST00000450717 COG3Q96JB2 828 aa16.42■□□□□ 0.22
SMARCA4-205ENST00000450717 CCDC7Q96M83 1385 aa16.41■□□□□ 0.22
SMARCA4-205ENST00000450717 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
SMARCA4-205ENST00000450717 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
SMARCA4-205ENST00000450717 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
SMARCA4-205ENST00000450717 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
SMARCA4-205ENST00000450717 PHF14O94880 888 aa16.4■□□□□ 0.22
SMARCA4-205ENST00000450717 CCDC34Q96HJ3 373 aa16.4■□□□□ 0.22
SMARCA4-205ENST00000450717 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
SMARCA4-205ENST00000450717 PLIN1O60240 522 aa16.38■□□□□ 0.21
SMARCA4-205ENST00000450717 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
SMARCA4-205ENST00000450717 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
SMARCA4-205ENST00000450717 FANCIQ9NVI1 1328 aa16.37■□□□□ 0.21
SMARCA4-205ENST00000450717 APAF1O14727 1248 aa16.36■□□□□ 0.21
SMARCA4-205ENST00000450717 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
SMARCA4-205ENST00000450717 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
SMARCA4-205ENST00000450717 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
SMARCA4-205ENST00000450717 CLSTN1O94985 981 aa16.36■□□□□ 0.21
SMARCA4-205ENST00000450717 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
SMARCA4-205ENST00000450717 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 RRBP1Q9P2E9 1410 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
SMARCA4-205ENST00000450717 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.21
SMARCA4-205ENST00000450717 AAMPQ13685 434 aa16.33■□□□□ 0.2
SMARCA4-205ENST00000450717 RUNDC1Q96C34 613 aa16.32■□□□□ 0.2
SMARCA4-205ENST00000450717 PRDM2Q13029 1718 aa16.32■□□□□ 0.2
SMARCA4-205ENST00000450717 ROCK1Q13464 1354 aa16.32■□□□□ 0.2
SMARCA4-205ENST00000450717 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-205ENST00000450717 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-205ENST00000450717 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-205ENST00000450717 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-205ENST00000450717 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-205ENST00000450717 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
SMARCA4-205ENST00000450717 ATP6V1DQ9Y5K8 247 aa16.3■□□□□ 0.2
SMARCA4-205ENST00000450717 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-205ENST00000450717 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
SMARCA4-205ENST00000450717 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-205ENST00000450717 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
SMARCA4-205ENST00000450717 ZNF644Q9H582 1327 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-205ENST00000450717 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
SMARCA4-205ENST00000450717 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMARCA4-205ENST00000450717 REC8O95072 547 aa16.28■□□□□ 0.2
SMARCA4-205ENST00000450717 RIPK4P57078 832 aa16.28■□□□□ 0.2
SMARCA4-205ENST00000450717 GSE1Q14687 1217 aa16.27■□□□□ 0.19
SMARCA4-205ENST00000450717 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms